Gene : Brara.G01289 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.7.1.148 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase / CMK Genomic Order:  1289
Name:  ? Brara.G01289 Secondary Identifier:  ? PAC:30634997
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7560 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01289 0.5kb upstream 0.5kb upstream 2827 true A07: 13600489-13603315 Brassica rapa FPsc
Brara.G01289 0.5kb upstream 0.5kb upstream 500 false A07: 13602816-13603315 Brassica rapa FPsc
Brara.G01289 0.5kb downstream 0.5kb downstream 2827 true A07: 13599989-13602815 Brassica rapa FPsc
Brara.G01289 0.5kb downstream 0.5kb downstream 500 false A07: 13599989-13600488 Brassica rapa FPsc
Brara.G01289 1.0kb upstream 1.0kb upstream 3327 true A07: 13600489-13603815 Brassica rapa FPsc
Brara.G01289 1.0kb upstream 1.0kb upstream 1000 false A07: 13602816-13603815 Brassica rapa FPsc
Brara.G01289 1.0kb downstream 1.0kb downstream 3327 true A07: 13599489-13602815 Brassica rapa FPsc
Brara.G01289 1.0kb downstream 1.0kb downstream 1000 false A07: 13599489-13600488 Brassica rapa FPsc
Brara.G01289 2.0kb upstream 2.0kb upstream 4327 true A07: 13600489-13604815 Brassica rapa FPsc
Brara.G01289 2.0kb upstream 2.0kb upstream 2000 false A07: 13602816-13604815 Brassica rapa FPsc
Brara.G01289 2.0kb downstream 2.0kb downstream 4327 true A07: 13598489-13602815 Brassica rapa FPsc
Brara.G01289 2.0kb downstream 2.0kb downstream 2000 false A07: 13598489-13600488 Brassica rapa FPsc
Brara.G01289 5.0kb upstream 5.0kb upstream 7327 true A07: 13600489-13607815 Brassica rapa FPsc
Brara.G01289 5.0kb upstream 5.0kb upstream 5000 false A07: 13602816-13607815 Brassica rapa FPsc
Brara.G01289 5.0kb downstream 5.0kb downstream 7327 true A07: 13595489-13602815 Brassica rapa FPsc
Brara.G01289 5.0kb downstream 5.0kb downstream 5000 false A07: 13595489-13600488 Brassica rapa FPsc
Brara.G01289 10.0kb upstream 10.0kb upstream 12327 true A07: 13600489-13612815 Brassica rapa FPsc
Brara.G01289 10.0kb upstream 10.0kb upstream 10000 false A07: 13602816-13612815 Brassica rapa FPsc
Brara.G01289 10.0kb downstream 10.0kb downstream 12327 true A07: 13590489-13602815 Brassica rapa FPsc
Brara.G01289 10.0kb downstream 10.0kb downstream 10000 false A07: 13590489-13600488 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372695 5261 Brassicaceae View MSA
123831547 5264 Brassicales-Malvales View MSA
124340153 5266 SBM View MSA
124238115 5268 Malvidae View MSA
124062770 5270 Rosid View MSA
123737425 5271 Pentapetalae View MSA
122788330 5272 Eudicot View MSA
122044611 5273 Angiosperm View MSA
121345778 5274 Embryophyte View MSA
123424084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier