Gene : Brara.D01685 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  1685
Name:  ? Brara.D01685 Secondary Identifier:  ? PAC:30621223
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6854 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01685 0.5kb upstream 0.5kb upstream 2034 true A04: 14741551-14743584 Brassica rapa FPsc
Brara.D01685 0.5kb upstream 0.5kb upstream 500 false A04: 14741551-14742050 Brassica rapa FPsc
Brara.D01685 0.5kb downstream 0.5kb downstream 2034 true A04: 14742051-14744084 Brassica rapa FPsc
Brara.D01685 0.5kb downstream 0.5kb downstream 500 false A04: 14743585-14744084 Brassica rapa FPsc
Brara.D01685 1.0kb upstream 1.0kb upstream 2534 true A04: 14741051-14743584 Brassica rapa FPsc
Brara.D01685 1.0kb upstream 1.0kb upstream 1000 false A04: 14741051-14742050 Brassica rapa FPsc
Brara.D01685 1.0kb downstream 1.0kb downstream 2534 true A04: 14742051-14744584 Brassica rapa FPsc
Brara.D01685 1.0kb downstream 1.0kb downstream 1000 false A04: 14743585-14744584 Brassica rapa FPsc
Brara.D01685 2.0kb upstream 2.0kb upstream 3534 true A04: 14740051-14743584 Brassica rapa FPsc
Brara.D01685 2.0kb upstream 2.0kb upstream 2000 false A04: 14740051-14742050 Brassica rapa FPsc
Brara.D01685 2.0kb downstream 2.0kb downstream 3534 true A04: 14742051-14745584 Brassica rapa FPsc
Brara.D01685 2.0kb downstream 2.0kb downstream 2000 false A04: 14743585-14745584 Brassica rapa FPsc
Brara.D01685 5.0kb upstream 5.0kb upstream 6534 true A04: 14737051-14743584 Brassica rapa FPsc
Brara.D01685 5.0kb upstream 5.0kb upstream 5000 false A04: 14737051-14742050 Brassica rapa FPsc
Brara.D01685 5.0kb downstream 5.0kb downstream 6534 true A04: 14742051-14748584 Brassica rapa FPsc
Brara.D01685 5.0kb downstream 5.0kb downstream 5000 false A04: 14743585-14748584 Brassica rapa FPsc
Brara.D01685 10.0kb upstream 10.0kb upstream 11534 true A04: 14732051-14743584 Brassica rapa FPsc
Brara.D01685 10.0kb upstream 10.0kb upstream 10000 false A04: 14732051-14742050 Brassica rapa FPsc
Brara.D01685 10.0kb downstream 10.0kb downstream 11534 true A04: 14742051-14753584 Brassica rapa FPsc
Brara.D01685 10.0kb downstream 10.0kb downstream 10000 false A04: 14743585-14753584 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375601 5261 Brassicaceae View MSA
123837251 5264 Brassicales-Malvales View MSA
124340795 5266 SBM View MSA
124253159 5268 Malvidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier