Gene : Brara.A03039 B. rapa FPsc v1.3
Defline:  (1 of 279) PF00847 - AP2 domain (AP2) Genomic Order:  3039
Name:  ? Brara.A03039 Secondary Identifier:  ? PAC:30638744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03039 0.5kb upstream 0.5kb upstream 1752 true A01: 25831534-25833285 Brassica rapa FPsc
Brara.A03039 0.5kb upstream 0.5kb upstream 500 false A01: 25832786-25833285 Brassica rapa FPsc
Brara.A03039 0.5kb downstream 0.5kb downstream 1752 true A01: 25831034-25832785 Brassica rapa FPsc
Brara.A03039 0.5kb downstream 0.5kb downstream 500 false A01: 25831034-25831533 Brassica rapa FPsc
Brara.A03039 1.0kb upstream 1.0kb upstream 2252 true A01: 25831534-25833785 Brassica rapa FPsc
Brara.A03039 1.0kb upstream 1.0kb upstream 1000 false A01: 25832786-25833785 Brassica rapa FPsc
Brara.A03039 1.0kb downstream 1.0kb downstream 2252 true A01: 25830534-25832785 Brassica rapa FPsc
Brara.A03039 1.0kb downstream 1.0kb downstream 1000 false A01: 25830534-25831533 Brassica rapa FPsc
Brara.A03039 2.0kb upstream 2.0kb upstream 3252 true A01: 25831534-25834785 Brassica rapa FPsc
Brara.A03039 2.0kb upstream 2.0kb upstream 2000 false A01: 25832786-25834785 Brassica rapa FPsc
Brara.A03039 2.0kb downstream 2.0kb downstream 3252 true A01: 25829534-25832785 Brassica rapa FPsc
Brara.A03039 2.0kb downstream 2.0kb downstream 2000 false A01: 25829534-25831533 Brassica rapa FPsc
Brara.A03039 5.0kb upstream 5.0kb upstream 6252 true A01: 25831534-25837785 Brassica rapa FPsc
Brara.A03039 5.0kb upstream 5.0kb upstream 5000 false A01: 25832786-25837785 Brassica rapa FPsc
Brara.A03039 5.0kb downstream 5.0kb downstream 6252 true A01: 25826534-25832785 Brassica rapa FPsc
Brara.A03039 5.0kb downstream 5.0kb downstream 5000 false A01: 25826534-25831533 Brassica rapa FPsc
Brara.A03039 10.0kb upstream 10.0kb upstream 11252 true A01: 25831534-25842785 Brassica rapa FPsc
Brara.A03039 10.0kb upstream 10.0kb upstream 10000 false A01: 25832786-25842785 Brassica rapa FPsc
Brara.A03039 10.0kb downstream 10.0kb downstream 11252 true A01: 25821534-25832785 Brassica rapa FPsc
Brara.A03039 10.0kb downstream 10.0kb downstream 10000 false A01: 25821534-25831533 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377729 5261 Brassicaceae View MSA
123839333 5264 Brassicales-Malvales View MSA
124338239 5266 SBM View MSA
124245047 5268 Malvidae View MSA
124065952 5270 Rosid View MSA
123736884 5271 Pentapetalae View MSA
122769881 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier