Gene : Brara.G01126 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR19384//PTHR19384:SF82 - FLAVODOXIN-RELATED Genomic Order:  1126
Name:  ? Brara.G01126 Secondary Identifier:  ? PAC:30636019
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01126 0.5kb upstream 0.5kb upstream 2586 true A07: 12451205-12453790 Brassica rapa FPsc
Brara.G01126 0.5kb upstream 0.5kb upstream 500 false A07: 12453291-12453790 Brassica rapa FPsc
Brara.G01126 0.5kb downstream 0.5kb downstream 2586 true A07: 12450705-12453290 Brassica rapa FPsc
Brara.G01126 0.5kb downstream 0.5kb downstream 500 false A07: 12450705-12451204 Brassica rapa FPsc
Brara.G01126 1.0kb upstream 1.0kb upstream 3086 true A07: 12451205-12454290 Brassica rapa FPsc
Brara.G01126 1.0kb upstream 1.0kb upstream 1000 false A07: 12453291-12454290 Brassica rapa FPsc
Brara.G01126 1.0kb downstream 1.0kb downstream 3086 true A07: 12450205-12453290 Brassica rapa FPsc
Brara.G01126 1.0kb downstream 1.0kb downstream 1000 false A07: 12450205-12451204 Brassica rapa FPsc
Brara.G01126 2.0kb upstream 2.0kb upstream 4086 true A07: 12451205-12455290 Brassica rapa FPsc
Brara.G01126 2.0kb upstream 2.0kb upstream 2000 false A07: 12453291-12455290 Brassica rapa FPsc
Brara.G01126 2.0kb downstream 2.0kb downstream 4086 true A07: 12449205-12453290 Brassica rapa FPsc
Brara.G01126 2.0kb downstream 2.0kb downstream 2000 false A07: 12449205-12451204 Brassica rapa FPsc
Brara.G01126 5.0kb upstream 5.0kb upstream 7086 true A07: 12451205-12458290 Brassica rapa FPsc
Brara.G01126 5.0kb upstream 5.0kb upstream 5000 false A07: 12453291-12458290 Brassica rapa FPsc
Brara.G01126 5.0kb downstream 5.0kb downstream 7086 true A07: 12446205-12453290 Brassica rapa FPsc
Brara.G01126 5.0kb downstream 5.0kb downstream 5000 false A07: 12446205-12451204 Brassica rapa FPsc
Brara.G01126 10.0kb upstream 10.0kb upstream 12086 true A07: 12451205-12463290 Brassica rapa FPsc
Brara.G01126 10.0kb upstream 10.0kb upstream 10000 false A07: 12453291-12463290 Brassica rapa FPsc
Brara.G01126 10.0kb downstream 10.0kb downstream 12086 true A07: 12441205-12453290 Brassica rapa FPsc
Brara.G01126 10.0kb downstream 10.0kb downstream 10000 false A07: 12441205-12451204 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371092 5261 Brassicaceae View MSA
123836263 5264 Brassicales-Malvales View MSA
124346878 5266 SBM View MSA
124237795 5268 Malvidae View MSA
124067432 5270 Rosid View MSA
123738149 5271 Pentapetalae View MSA
122792812 5272 Eudicot View MSA
122047092 5273 Angiosperm View MSA
121345417 5274 Embryophyte View MSA
123380214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier