Gene : Brara.G01164 B. rapa FPsc v1.3

Defline:  (1 of 30) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1164
Name:  ? Brara.G01164 Secondary Identifier:  ? PAC:30633418

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01164 0.5kb upstream 0.5kb upstream 3172 true A07: 12792938-12796109 Brassica rapa FPsc
Brara.G01164 0.5kb upstream 0.5kb upstream 500 false A07: 12795610-12796109 Brassica rapa FPsc
Brara.G01164 0.5kb downstream 0.5kb downstream 3172 true A07: 12792438-12795609 Brassica rapa FPsc
Brara.G01164 0.5kb downstream 0.5kb downstream 500 false A07: 12792438-12792937 Brassica rapa FPsc
Brara.G01164 1.0kb upstream 1.0kb upstream 3672 true A07: 12792938-12796609 Brassica rapa FPsc
Brara.G01164 1.0kb upstream 1.0kb upstream 1000 false A07: 12795610-12796609 Brassica rapa FPsc
Brara.G01164 1.0kb downstream 1.0kb downstream 3672 true A07: 12791938-12795609 Brassica rapa FPsc
Brara.G01164 1.0kb downstream 1.0kb downstream 1000 false A07: 12791938-12792937 Brassica rapa FPsc
Brara.G01164 2.0kb upstream 2.0kb upstream 4672 true A07: 12792938-12797609 Brassica rapa FPsc
Brara.G01164 2.0kb upstream 2.0kb upstream 2000 false A07: 12795610-12797609 Brassica rapa FPsc
Brara.G01164 2.0kb downstream 2.0kb downstream 4672 true A07: 12790938-12795609 Brassica rapa FPsc
Brara.G01164 2.0kb downstream 2.0kb downstream 2000 false A07: 12790938-12792937 Brassica rapa FPsc
Brara.G01164 5.0kb upstream 5.0kb upstream 7672 true A07: 12792938-12800609 Brassica rapa FPsc
Brara.G01164 5.0kb upstream 5.0kb upstream 5000 false A07: 12795610-12800609 Brassica rapa FPsc
Brara.G01164 5.0kb downstream 5.0kb downstream 7672 true A07: 12787938-12795609 Brassica rapa FPsc
Brara.G01164 5.0kb downstream 5.0kb downstream 5000 false A07: 12787938-12792937 Brassica rapa FPsc
Brara.G01164 10.0kb upstream 10.0kb upstream 12672 true A07: 12792938-12805609 Brassica rapa FPsc
Brara.G01164 10.0kb upstream 10.0kb upstream 10000 false A07: 12795610-12805609 Brassica rapa FPsc
Brara.G01164 10.0kb downstream 10.0kb downstream 12672 true A07: 12782938-12795609 Brassica rapa FPsc
Brara.G01164 10.0kb downstream 10.0kb downstream 10000 false A07: 12782938-12792937 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368907 5261 Brassicaceae View MSA
123828132 5264 Brassicales-Malvales View MSA
124337858 5266 SBM View MSA
124238958 5268 Malvidae View MSA
124060971 5270 Rosid View MSA
123750839 5271 Pentapetalae View MSA
122787854 5272 Eudicot View MSA
122046367 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier