Gene : Brara.G01230 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  1230
Name:  ? Brara.G01230 Secondary Identifier:  ? PAC:30635330
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01230 0.5kb upstream 0.5kb upstream 4355 true A07: 13188375-13192729 Brassica rapa FPsc
Brara.G01230 0.5kb upstream 0.5kb upstream 500 false A07: 13192230-13192729 Brassica rapa FPsc
Brara.G01230 0.5kb downstream 0.5kb downstream 4355 true A07: 13187875-13192229 Brassica rapa FPsc
Brara.G01230 0.5kb downstream 0.5kb downstream 500 false A07: 13187875-13188374 Brassica rapa FPsc
Brara.G01230 1.0kb upstream 1.0kb upstream 4855 true A07: 13188375-13193229 Brassica rapa FPsc
Brara.G01230 1.0kb upstream 1.0kb upstream 1000 false A07: 13192230-13193229 Brassica rapa FPsc
Brara.G01230 1.0kb downstream 1.0kb downstream 4855 true A07: 13187375-13192229 Brassica rapa FPsc
Brara.G01230 1.0kb downstream 1.0kb downstream 1000 false A07: 13187375-13188374 Brassica rapa FPsc
Brara.G01230 2.0kb upstream 2.0kb upstream 5855 true A07: 13188375-13194229 Brassica rapa FPsc
Brara.G01230 2.0kb upstream 2.0kb upstream 2000 false A07: 13192230-13194229 Brassica rapa FPsc
Brara.G01230 2.0kb downstream 2.0kb downstream 5855 true A07: 13186375-13192229 Brassica rapa FPsc
Brara.G01230 2.0kb downstream 2.0kb downstream 2000 false A07: 13186375-13188374 Brassica rapa FPsc
Brara.G01230 5.0kb upstream 5.0kb upstream 8855 true A07: 13188375-13197229 Brassica rapa FPsc
Brara.G01230 5.0kb upstream 5.0kb upstream 5000 false A07: 13192230-13197229 Brassica rapa FPsc
Brara.G01230 5.0kb downstream 5.0kb downstream 8855 true A07: 13183375-13192229 Brassica rapa FPsc
Brara.G01230 5.0kb downstream 5.0kb downstream 5000 false A07: 13183375-13188374 Brassica rapa FPsc
Brara.G01230 10.0kb upstream 10.0kb upstream 13855 true A07: 13188375-13202229 Brassica rapa FPsc
Brara.G01230 10.0kb upstream 10.0kb upstream 10000 false A07: 13192230-13202229 Brassica rapa FPsc
Brara.G01230 10.0kb downstream 10.0kb downstream 13855 true A07: 13178375-13192229 Brassica rapa FPsc
Brara.G01230 10.0kb downstream 10.0kb downstream 10000 false A07: 13178375-13188374 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372416 5261 Brassicaceae View MSA
123827742 5264 Brassicales-Malvales View MSA
124339577 5266 SBM View MSA
124254053 5268 Malvidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier