Gene : Brara.A02880 B. rapa FPsc v1.3
Defline:  (1 of 4) 3.1.3.16//3.1.3.48//3.1.3.67 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase // Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  2880
Name:  ? Brara.A02880 Secondary Identifier:  ? PAC:30636528
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6368 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02880 0.5kb upstream 0.5kb upstream 5065 true A01: 24481977-24487041 Brassica rapa FPsc
Brara.A02880 0.5kb upstream 0.5kb upstream 500 false A01: 24481977-24482476 Brassica rapa FPsc
Brara.A02880 0.5kb downstream 0.5kb downstream 5065 true A01: 24482477-24487541 Brassica rapa FPsc
Brara.A02880 0.5kb downstream 0.5kb downstream 500 false A01: 24487042-24487541 Brassica rapa FPsc
Brara.A02880 1.0kb upstream 1.0kb upstream 5565 true A01: 24481477-24487041 Brassica rapa FPsc
Brara.A02880 1.0kb upstream 1.0kb upstream 1000 false A01: 24481477-24482476 Brassica rapa FPsc
Brara.A02880 1.0kb downstream 1.0kb downstream 5565 true A01: 24482477-24488041 Brassica rapa FPsc
Brara.A02880 1.0kb downstream 1.0kb downstream 1000 false A01: 24487042-24488041 Brassica rapa FPsc
Brara.A02880 2.0kb upstream 2.0kb upstream 6565 true A01: 24480477-24487041 Brassica rapa FPsc
Brara.A02880 2.0kb upstream 2.0kb upstream 2000 false A01: 24480477-24482476 Brassica rapa FPsc
Brara.A02880 2.0kb downstream 2.0kb downstream 6565 true A01: 24482477-24489041 Brassica rapa FPsc
Brara.A02880 2.0kb downstream 2.0kb downstream 2000 false A01: 24487042-24489041 Brassica rapa FPsc
Brara.A02880 5.0kb upstream 5.0kb upstream 9565 true A01: 24477477-24487041 Brassica rapa FPsc
Brara.A02880 5.0kb upstream 5.0kb upstream 5000 false A01: 24477477-24482476 Brassica rapa FPsc
Brara.A02880 5.0kb downstream 5.0kb downstream 9565 true A01: 24482477-24492041 Brassica rapa FPsc
Brara.A02880 5.0kb downstream 5.0kb downstream 5000 false A01: 24487042-24492041 Brassica rapa FPsc
Brara.A02880 10.0kb upstream 10.0kb upstream 14565 true A01: 24472477-24487041 Brassica rapa FPsc
Brara.A02880 10.0kb upstream 10.0kb upstream 10000 false A01: 24472477-24482476 Brassica rapa FPsc
Brara.A02880 10.0kb downstream 10.0kb downstream 14565 true A01: 24482477-24497041 Brassica rapa FPsc
Brara.A02880 10.0kb downstream 10.0kb downstream 10000 false A01: 24487042-24497041 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781340 5273 Angiosperm View MSA
122352198 5261 Brassicaceae Singleton cluster - no MSA
123790968 5264 Brassicales-Malvales Singleton cluster - no MSA
124288897 5266 SBM Singleton cluster - no MSA
124256004 5268 Malvidae View MSA
124041406 5270 Rosid View MSA
123749376 5271 Pentapetalae View MSA
122773115 5272 Eudicot View MSA
121052917 5274 Embryophyte View MSA
123428601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier