Gene : Brara.A02893 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11088:SF27 - ADENYLATE ISOPENTENYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2893
Name:  ? Brara.A02893 Secondary Identifier:  ? PAC:30636616
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2681 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02893 0.5kb upstream 0.5kb upstream 2222 true A01: 24621659-24623880 Brassica rapa FPsc
Brara.A02893 0.5kb upstream 0.5kb upstream 500 false A01: 24621659-24622158 Brassica rapa FPsc
Brara.A02893 0.5kb downstream 0.5kb downstream 2222 true A01: 24622159-24624380 Brassica rapa FPsc
Brara.A02893 0.5kb downstream 0.5kb downstream 500 false A01: 24623881-24624380 Brassica rapa FPsc
Brara.A02893 1.0kb upstream 1.0kb upstream 2722 true A01: 24621159-24623880 Brassica rapa FPsc
Brara.A02893 1.0kb upstream 1.0kb upstream 1000 false A01: 24621159-24622158 Brassica rapa FPsc
Brara.A02893 1.0kb downstream 1.0kb downstream 2722 true A01: 24622159-24624880 Brassica rapa FPsc
Brara.A02893 1.0kb downstream 1.0kb downstream 1000 false A01: 24623881-24624880 Brassica rapa FPsc
Brara.A02893 2.0kb upstream 2.0kb upstream 3722 true A01: 24620159-24623880 Brassica rapa FPsc
Brara.A02893 2.0kb upstream 2.0kb upstream 2000 false A01: 24620159-24622158 Brassica rapa FPsc
Brara.A02893 2.0kb downstream 2.0kb downstream 3722 true A01: 24622159-24625880 Brassica rapa FPsc
Brara.A02893 2.0kb downstream 2.0kb downstream 2000 false A01: 24623881-24625880 Brassica rapa FPsc
Brara.A02893 5.0kb upstream 5.0kb upstream 6722 true A01: 24617159-24623880 Brassica rapa FPsc
Brara.A02893 5.0kb upstream 5.0kb upstream 5000 false A01: 24617159-24622158 Brassica rapa FPsc
Brara.A02893 5.0kb downstream 5.0kb downstream 6722 true A01: 24622159-24628880 Brassica rapa FPsc
Brara.A02893 5.0kb downstream 5.0kb downstream 5000 false A01: 24623881-24628880 Brassica rapa FPsc
Brara.A02893 10.0kb upstream 10.0kb upstream 11722 true A01: 24612159-24623880 Brassica rapa FPsc
Brara.A02893 10.0kb upstream 10.0kb upstream 10000 false A01: 24612159-24622158 Brassica rapa FPsc
Brara.A02893 10.0kb downstream 10.0kb downstream 11722 true A01: 24622159-24633880 Brassica rapa FPsc
Brara.A02893 10.0kb downstream 10.0kb downstream 10000 false A01: 24623881-24633880 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361954 5261 Brassicaceae View MSA
123798279 5264 Brassicales-Malvales View MSA
124349222 5266 SBM View MSA
124250835 5268 Malvidae View MSA
124061925 5270 Rosid View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier