Gene : Brara.G01090 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  1090
Name:  ? Brara.G01090 Secondary Identifier:  ? PAC:30632764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01090 0.5kb upstream 0.5kb upstream 5390 true A07: 12171029-12176418 Brassica rapa FPsc
Brara.G01090 0.5kb upstream 0.5kb upstream 500 false A07: 12175919-12176418 Brassica rapa FPsc
Brara.G01090 0.5kb downstream 0.5kb downstream 5390 true A07: 12170529-12175918 Brassica rapa FPsc
Brara.G01090 0.5kb downstream 0.5kb downstream 500 false A07: 12170529-12171028 Brassica rapa FPsc
Brara.G01090 1.0kb upstream 1.0kb upstream 5890 true A07: 12171029-12176918 Brassica rapa FPsc
Brara.G01090 1.0kb upstream 1.0kb upstream 1000 false A07: 12175919-12176918 Brassica rapa FPsc
Brara.G01090 1.0kb downstream 1.0kb downstream 5890 true A07: 12170029-12175918 Brassica rapa FPsc
Brara.G01090 1.0kb downstream 1.0kb downstream 1000 false A07: 12170029-12171028 Brassica rapa FPsc
Brara.G01090 2.0kb upstream 2.0kb upstream 6890 true A07: 12171029-12177918 Brassica rapa FPsc
Brara.G01090 2.0kb upstream 2.0kb upstream 2000 false A07: 12175919-12177918 Brassica rapa FPsc
Brara.G01090 2.0kb downstream 2.0kb downstream 6890 true A07: 12169029-12175918 Brassica rapa FPsc
Brara.G01090 2.0kb downstream 2.0kb downstream 2000 false A07: 12169029-12171028 Brassica rapa FPsc
Brara.G01090 5.0kb upstream 5.0kb upstream 9890 true A07: 12171029-12180918 Brassica rapa FPsc
Brara.G01090 5.0kb upstream 5.0kb upstream 5000 false A07: 12175919-12180918 Brassica rapa FPsc
Brara.G01090 5.0kb downstream 5.0kb downstream 9890 true A07: 12166029-12175918 Brassica rapa FPsc
Brara.G01090 5.0kb downstream 5.0kb downstream 5000 false A07: 12166029-12171028 Brassica rapa FPsc
Brara.G01090 10.0kb upstream 10.0kb upstream 14890 true A07: 12171029-12185918 Brassica rapa FPsc
Brara.G01090 10.0kb upstream 10.0kb upstream 10000 false A07: 12175919-12185918 Brassica rapa FPsc
Brara.G01090 10.0kb downstream 10.0kb downstream 14890 true A07: 12161029-12175918 Brassica rapa FPsc
Brara.G01090 10.0kb downstream 10.0kb downstream 10000 false A07: 12161029-12171028 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373242 5261 Brassicaceae View MSA
123833011 5264 Brassicales-Malvales View MSA
124346416 5266 SBM View MSA
124252000 5268 Malvidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier