Gene : Brara.D01569 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10000:SF8 - HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3 Genomic Order:  1569
Name:  ? Brara.D01569 Secondary Identifier:  ? PAC:30621276
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCOSE1PMETAB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3881 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-882 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01569 0.5kb upstream 0.5kb upstream 3705 true A04: 13936498-13940202 Brassica rapa FPsc
Brara.D01569 0.5kb upstream 0.5kb upstream 500 false A04: 13936498-13936997 Brassica rapa FPsc
Brara.D01569 0.5kb downstream 0.5kb downstream 3705 true A04: 13936998-13940702 Brassica rapa FPsc
Brara.D01569 0.5kb downstream 0.5kb downstream 500 false A04: 13940203-13940702 Brassica rapa FPsc
Brara.D01569 1.0kb upstream 1.0kb upstream 4205 true A04: 13935998-13940202 Brassica rapa FPsc
Brara.D01569 1.0kb upstream 1.0kb upstream 1000 false A04: 13935998-13936997 Brassica rapa FPsc
Brara.D01569 1.0kb downstream 1.0kb downstream 4205 true A04: 13936998-13941202 Brassica rapa FPsc
Brara.D01569 1.0kb downstream 1.0kb downstream 1000 false A04: 13940203-13941202 Brassica rapa FPsc
Brara.D01569 2.0kb upstream 2.0kb upstream 5205 true A04: 13934998-13940202 Brassica rapa FPsc
Brara.D01569 2.0kb upstream 2.0kb upstream 2000 false A04: 13934998-13936997 Brassica rapa FPsc
Brara.D01569 2.0kb downstream 2.0kb downstream 5205 true A04: 13936998-13942202 Brassica rapa FPsc
Brara.D01569 2.0kb downstream 2.0kb downstream 2000 false A04: 13940203-13942202 Brassica rapa FPsc
Brara.D01569 5.0kb upstream 5.0kb upstream 8205 true A04: 13931998-13940202 Brassica rapa FPsc
Brara.D01569 5.0kb upstream 5.0kb upstream 5000 false A04: 13931998-13936997 Brassica rapa FPsc
Brara.D01569 5.0kb downstream 5.0kb downstream 8205 true A04: 13936998-13945202 Brassica rapa FPsc
Brara.D01569 5.0kb downstream 5.0kb downstream 5000 false A04: 13940203-13945202 Brassica rapa FPsc
Brara.D01569 10.0kb upstream 10.0kb upstream 13205 true A04: 13926998-13940202 Brassica rapa FPsc
Brara.D01569 10.0kb upstream 10.0kb upstream 10000 false A04: 13926998-13936997 Brassica rapa FPsc
Brara.D01569 10.0kb downstream 10.0kb downstream 13205 true A04: 13936998-13950202 Brassica rapa FPsc
Brara.D01569 10.0kb downstream 10.0kb downstream 10000 false A04: 13940203-13950202 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372098 5261 Brassicaceae View MSA
123828074 5264 Brassicales-Malvales View MSA
124342192 5266 SBM View MSA
124242527 5268 Malvidae View MSA
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier