Gene : Brara.A02630 B. rapa FPsc v1.3
Defline:  (1 of 10) 2.5.1.112 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase Genomic Order:  2630
Name:  ? Brara.A02630 Secondary Identifier:  ? PAC:30637625
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2681 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02630 0.5kb upstream 0.5kb upstream 1499 true A01: 22010766-22012264 Brassica rapa FPsc
Brara.A02630 0.5kb upstream 0.5kb upstream 500 false A01: 22011765-22012264 Brassica rapa FPsc
Brara.A02630 0.5kb downstream 0.5kb downstream 1499 true A01: 22010266-22011764 Brassica rapa FPsc
Brara.A02630 0.5kb downstream 0.5kb downstream 500 false A01: 22010266-22010765 Brassica rapa FPsc
Brara.A02630 1.0kb upstream 1.0kb upstream 1999 true A01: 22010766-22012764 Brassica rapa FPsc
Brara.A02630 1.0kb upstream 1.0kb upstream 1000 false A01: 22011765-22012764 Brassica rapa FPsc
Brara.A02630 1.0kb downstream 1.0kb downstream 1999 true A01: 22009766-22011764 Brassica rapa FPsc
Brara.A02630 1.0kb downstream 1.0kb downstream 1000 false A01: 22009766-22010765 Brassica rapa FPsc
Brara.A02630 2.0kb upstream 2.0kb upstream 2999 true A01: 22010766-22013764 Brassica rapa FPsc
Brara.A02630 2.0kb upstream 2.0kb upstream 2000 false A01: 22011765-22013764 Brassica rapa FPsc
Brara.A02630 2.0kb downstream 2.0kb downstream 2999 true A01: 22008766-22011764 Brassica rapa FPsc
Brara.A02630 2.0kb downstream 2.0kb downstream 2000 false A01: 22008766-22010765 Brassica rapa FPsc
Brara.A02630 5.0kb upstream 5.0kb upstream 5999 true A01: 22010766-22016764 Brassica rapa FPsc
Brara.A02630 5.0kb upstream 5.0kb upstream 5000 false A01: 22011765-22016764 Brassica rapa FPsc
Brara.A02630 5.0kb downstream 5.0kb downstream 5999 true A01: 22005766-22011764 Brassica rapa FPsc
Brara.A02630 5.0kb downstream 5.0kb downstream 5000 false A01: 22005766-22010765 Brassica rapa FPsc
Brara.A02630 10.0kb upstream 10.0kb upstream 10999 true A01: 22010766-22021764 Brassica rapa FPsc
Brara.A02630 10.0kb upstream 10.0kb upstream 10000 false A01: 22011765-22021764 Brassica rapa FPsc
Brara.A02630 10.0kb downstream 10.0kb downstream 10999 true A01: 22000766-22011764 Brassica rapa FPsc
Brara.A02630 10.0kb downstream 10.0kb downstream 10000 false A01: 22000766-22010765 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352466 5261 Brassicaceae Singleton cluster - no MSA
123791195 5264 Brassicales-Malvales Singleton cluster - no MSA
124289118 5266 SBM Singleton cluster - no MSA
124142513 5268 Malvidae Singleton cluster - no MSA
124067788 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier