Gene : Brara.G00612 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR21000 - DIHYDROXY-ACID DEHYDRATASE DAD Genomic Order:  612
Name:  ? Brara.G00612 Secondary Identifier:  ? PAC:30633053
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ILEUSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc VALSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00612 0.5kb upstream 0.5kb upstream 3546 true A07: 7886405-7889950 Brassica rapa FPsc
Brara.G00612 0.5kb upstream 0.5kb upstream 500 false A07: 7886405-7886904 Brassica rapa FPsc
Brara.G00612 0.5kb downstream 0.5kb downstream 3546 true A07: 7886905-7890450 Brassica rapa FPsc
Brara.G00612 0.5kb downstream 0.5kb downstream 500 false A07: 7889951-7890450 Brassica rapa FPsc
Brara.G00612 1.0kb upstream 1.0kb upstream 4046 true A07: 7885905-7889950 Brassica rapa FPsc
Brara.G00612 1.0kb upstream 1.0kb upstream 1000 false A07: 7885905-7886904 Brassica rapa FPsc
Brara.G00612 1.0kb downstream 1.0kb downstream 4046 true A07: 7886905-7890950 Brassica rapa FPsc
Brara.G00612 1.0kb downstream 1.0kb downstream 1000 false A07: 7889951-7890950 Brassica rapa FPsc
Brara.G00612 2.0kb upstream 2.0kb upstream 5046 true A07: 7884905-7889950 Brassica rapa FPsc
Brara.G00612 2.0kb upstream 2.0kb upstream 2000 false A07: 7884905-7886904 Brassica rapa FPsc
Brara.G00612 2.0kb downstream 2.0kb downstream 5046 true A07: 7886905-7891950 Brassica rapa FPsc
Brara.G00612 2.0kb downstream 2.0kb downstream 2000 false A07: 7889951-7891950 Brassica rapa FPsc
Brara.G00612 5.0kb upstream 5.0kb upstream 8046 true A07: 7881905-7889950 Brassica rapa FPsc
Brara.G00612 5.0kb upstream 5.0kb upstream 5000 false A07: 7881905-7886904 Brassica rapa FPsc
Brara.G00612 5.0kb downstream 5.0kb downstream 8046 true A07: 7886905-7894950 Brassica rapa FPsc
Brara.G00612 5.0kb downstream 5.0kb downstream 5000 false A07: 7889951-7894950 Brassica rapa FPsc
Brara.G00612 10.0kb upstream 10.0kb upstream 13046 true A07: 7876905-7889950 Brassica rapa FPsc
Brara.G00612 10.0kb upstream 10.0kb upstream 10000 false A07: 7876905-7886904 Brassica rapa FPsc
Brara.G00612 10.0kb downstream 10.0kb downstream 13046 true A07: 7886905-7899950 Brassica rapa FPsc
Brara.G00612 10.0kb downstream 10.0kb downstream 10000 false A07: 7889951-7899950 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351310 5261 Brassicaceae Singleton cluster - no MSA
123790218 5264 Brassicales-Malvales Singleton cluster - no MSA
124288183 5266 SBM Singleton cluster - no MSA
124141740 5268 Malvidae Singleton cluster - no MSA
123868749 5270 Rosid Singleton cluster - no MSA
123453421 5271 Pentapetalae Singleton cluster - no MSA
122488886 5272 Eudicot Singleton cluster - no MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier