Gene : Brara.G02218 B. rapa FPsc v1.3
Defline:  (1 of 46) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  2218
Name:  ? Brara.G02218 Secondary Identifier:  ? PAC:30634328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02218 0.5kb upstream 0.5kb upstream 1938 true A07: 19316365-19318302 Brassica rapa FPsc
Brara.G02218 0.5kb upstream 0.5kb upstream 500 false A07: 19316365-19316864 Brassica rapa FPsc
Brara.G02218 0.5kb downstream 0.5kb downstream 1938 true A07: 19316865-19318802 Brassica rapa FPsc
Brara.G02218 0.5kb downstream 0.5kb downstream 500 false A07: 19318303-19318802 Brassica rapa FPsc
Brara.G02218 1.0kb upstream 1.0kb upstream 2438 true A07: 19315865-19318302 Brassica rapa FPsc
Brara.G02218 1.0kb upstream 1.0kb upstream 1000 false A07: 19315865-19316864 Brassica rapa FPsc
Brara.G02218 1.0kb downstream 1.0kb downstream 2438 true A07: 19316865-19319302 Brassica rapa FPsc
Brara.G02218 1.0kb downstream 1.0kb downstream 1000 false A07: 19318303-19319302 Brassica rapa FPsc
Brara.G02218 2.0kb upstream 2.0kb upstream 3438 true A07: 19314865-19318302 Brassica rapa FPsc
Brara.G02218 2.0kb upstream 2.0kb upstream 2000 false A07: 19314865-19316864 Brassica rapa FPsc
Brara.G02218 2.0kb downstream 2.0kb downstream 3438 true A07: 19316865-19320302 Brassica rapa FPsc
Brara.G02218 2.0kb downstream 2.0kb downstream 2000 false A07: 19318303-19320302 Brassica rapa FPsc
Brara.G02218 5.0kb upstream 5.0kb upstream 6438 true A07: 19311865-19318302 Brassica rapa FPsc
Brara.G02218 5.0kb upstream 5.0kb upstream 5000 false A07: 19311865-19316864 Brassica rapa FPsc
Brara.G02218 5.0kb downstream 5.0kb downstream 6438 true A07: 19316865-19323302 Brassica rapa FPsc
Brara.G02218 5.0kb downstream 5.0kb downstream 5000 false A07: 19318303-19323302 Brassica rapa FPsc
Brara.G02218 10.0kb upstream 10.0kb upstream 11438 true A07: 19306865-19318302 Brassica rapa FPsc
Brara.G02218 10.0kb upstream 10.0kb upstream 10000 false A07: 19306865-19316864 Brassica rapa FPsc
Brara.G02218 10.0kb downstream 10.0kb downstream 11438 true A07: 19316865-19328302 Brassica rapa FPsc
Brara.G02218 10.0kb downstream 10.0kb downstream 10000 false A07: 19318303-19328302 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351641 5261 Brassicaceae Singleton cluster - no MSA
123790502 5264 Brassicales-Malvales Singleton cluster - no MSA
124288453 5266 SBM Singleton cluster - no MSA
124141964 5268 Malvidae Singleton cluster - no MSA
123868933 5270 Rosid Singleton cluster - no MSA
123746577 5271 Pentapetalae View MSA
122790367 5272 Eudicot View MSA
122043422 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier