Gene : Brara.G02250 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  2250
Name:  ? Brara.G02250 Secondary Identifier:  ? PAC:30633956
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc FASYN-ELONG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5973 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7663 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02250 0.5kb upstream 0.5kb upstream 4288 true A07: 19489566-19493853 Brassica rapa FPsc
Brara.G02250 0.5kb upstream 0.5kb upstream 500 false A07: 19489566-19490065 Brassica rapa FPsc
Brara.G02250 0.5kb downstream 0.5kb downstream 4288 true A07: 19490066-19494353 Brassica rapa FPsc
Brara.G02250 0.5kb downstream 0.5kb downstream 500 false A07: 19493854-19494353 Brassica rapa FPsc
Brara.G02250 1.0kb upstream 1.0kb upstream 4788 true A07: 19489066-19493853 Brassica rapa FPsc
Brara.G02250 1.0kb upstream 1.0kb upstream 1000 false A07: 19489066-19490065 Brassica rapa FPsc
Brara.G02250 1.0kb downstream 1.0kb downstream 4788 true A07: 19490066-19494853 Brassica rapa FPsc
Brara.G02250 1.0kb downstream 1.0kb downstream 1000 false A07: 19493854-19494853 Brassica rapa FPsc
Brara.G02250 2.0kb upstream 2.0kb upstream 5788 true A07: 19488066-19493853 Brassica rapa FPsc
Brara.G02250 2.0kb upstream 2.0kb upstream 2000 false A07: 19488066-19490065 Brassica rapa FPsc
Brara.G02250 2.0kb downstream 2.0kb downstream 5788 true A07: 19490066-19495853 Brassica rapa FPsc
Brara.G02250 2.0kb downstream 2.0kb downstream 2000 false A07: 19493854-19495853 Brassica rapa FPsc
Brara.G02250 5.0kb upstream 5.0kb upstream 8788 true A07: 19485066-19493853 Brassica rapa FPsc
Brara.G02250 5.0kb upstream 5.0kb upstream 5000 false A07: 19485066-19490065 Brassica rapa FPsc
Brara.G02250 5.0kb downstream 5.0kb downstream 8788 true A07: 19490066-19498853 Brassica rapa FPsc
Brara.G02250 5.0kb downstream 5.0kb downstream 5000 false A07: 19493854-19498853 Brassica rapa FPsc
Brara.G02250 10.0kb upstream 10.0kb upstream 13788 true A07: 19480066-19493853 Brassica rapa FPsc
Brara.G02250 10.0kb upstream 10.0kb upstream 10000 false A07: 19480066-19490065 Brassica rapa FPsc
Brara.G02250 10.0kb downstream 10.0kb downstream 13788 true A07: 19490066-19503853 Brassica rapa FPsc
Brara.G02250 10.0kb downstream 10.0kb downstream 10000 false A07: 19493854-19503853 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351550 5261 Brassicaceae Singleton cluster - no MSA
123839489 5264 Brassicales-Malvales View MSA
124340409 5266 SBM View MSA
124244965 5268 Malvidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier