Gene : Brara.G02285 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23344//PTHR23344:SF19 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE Genomic Order:  2285
Name:  ? Brara.G02285 Secondary Identifier:  ? PAC:30635629
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7409 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02285 0.5kb upstream 0.5kb upstream 2751 true A07: 19679421-19682171 Brassica rapa FPsc
Brara.G02285 0.5kb upstream 0.5kb upstream 500 false A07: 19681672-19682171 Brassica rapa FPsc
Brara.G02285 0.5kb downstream 0.5kb downstream 2751 true A07: 19678921-19681671 Brassica rapa FPsc
Brara.G02285 0.5kb downstream 0.5kb downstream 500 false A07: 19678921-19679420 Brassica rapa FPsc
Brara.G02285 1.0kb upstream 1.0kb upstream 3251 true A07: 19679421-19682671 Brassica rapa FPsc
Brara.G02285 1.0kb upstream 1.0kb upstream 1000 false A07: 19681672-19682671 Brassica rapa FPsc
Brara.G02285 1.0kb downstream 1.0kb downstream 3251 true A07: 19678421-19681671 Brassica rapa FPsc
Brara.G02285 1.0kb downstream 1.0kb downstream 1000 false A07: 19678421-19679420 Brassica rapa FPsc
Brara.G02285 2.0kb upstream 2.0kb upstream 4251 true A07: 19679421-19683671 Brassica rapa FPsc
Brara.G02285 2.0kb upstream 2.0kb upstream 2000 false A07: 19681672-19683671 Brassica rapa FPsc
Brara.G02285 2.0kb downstream 2.0kb downstream 4251 true A07: 19677421-19681671 Brassica rapa FPsc
Brara.G02285 2.0kb downstream 2.0kb downstream 2000 false A07: 19677421-19679420 Brassica rapa FPsc
Brara.G02285 5.0kb upstream 5.0kb upstream 7251 true A07: 19679421-19686671 Brassica rapa FPsc
Brara.G02285 5.0kb upstream 5.0kb upstream 5000 false A07: 19681672-19686671 Brassica rapa FPsc
Brara.G02285 5.0kb downstream 5.0kb downstream 7251 true A07: 19674421-19681671 Brassica rapa FPsc
Brara.G02285 5.0kb downstream 5.0kb downstream 5000 false A07: 19674421-19679420 Brassica rapa FPsc
Brara.G02285 10.0kb upstream 10.0kb upstream 12251 true A07: 19679421-19691671 Brassica rapa FPsc
Brara.G02285 10.0kb upstream 10.0kb upstream 10000 false A07: 19681672-19691671 Brassica rapa FPsc
Brara.G02285 10.0kb downstream 10.0kb downstream 12251 true A07: 19669421-19681671 Brassica rapa FPsc
Brara.G02285 10.0kb downstream 10.0kb downstream 10000 false A07: 19669421-19679420 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375222 5261 Brassicaceae View MSA
123837095 5264 Brassicales-Malvales View MSA
124341825 5266 SBM View MSA
124250992 5268 Malvidae View MSA
124061908 5270 Rosid View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier