Gene : Brara.G02075 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11406:SF9 - PHOSPHOGLYCERATE KINASE Genomic Order:  2075
Name:  ? Brara.G02075 Secondary Identifier:  ? PAC:30633660
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02075 0.5kb upstream 0.5kb upstream 2808 true A07: 18452749-18455556 Brassica rapa FPsc
Brara.G02075 0.5kb upstream 0.5kb upstream 500 false A07: 18452749-18453248 Brassica rapa FPsc
Brara.G02075 0.5kb downstream 0.5kb downstream 2808 true A07: 18453249-18456056 Brassica rapa FPsc
Brara.G02075 0.5kb downstream 0.5kb downstream 500 false A07: 18455557-18456056 Brassica rapa FPsc
Brara.G02075 1.0kb upstream 1.0kb upstream 3308 true A07: 18452249-18455556 Brassica rapa FPsc
Brara.G02075 1.0kb upstream 1.0kb upstream 1000 false A07: 18452249-18453248 Brassica rapa FPsc
Brara.G02075 1.0kb downstream 1.0kb downstream 3308 true A07: 18453249-18456556 Brassica rapa FPsc
Brara.G02075 1.0kb downstream 1.0kb downstream 1000 false A07: 18455557-18456556 Brassica rapa FPsc
Brara.G02075 2.0kb upstream 2.0kb upstream 4308 true A07: 18451249-18455556 Brassica rapa FPsc
Brara.G02075 2.0kb upstream 2.0kb upstream 2000 false A07: 18451249-18453248 Brassica rapa FPsc
Brara.G02075 2.0kb downstream 2.0kb downstream 4308 true A07: 18453249-18457556 Brassica rapa FPsc
Brara.G02075 2.0kb downstream 2.0kb downstream 2000 false A07: 18455557-18457556 Brassica rapa FPsc
Brara.G02075 5.0kb upstream 5.0kb upstream 7308 true A07: 18448249-18455556 Brassica rapa FPsc
Brara.G02075 5.0kb upstream 5.0kb upstream 5000 false A07: 18448249-18453248 Brassica rapa FPsc
Brara.G02075 5.0kb downstream 5.0kb downstream 7308 true A07: 18453249-18460556 Brassica rapa FPsc
Brara.G02075 5.0kb downstream 5.0kb downstream 5000 false A07: 18455557-18460556 Brassica rapa FPsc
Brara.G02075 10.0kb upstream 10.0kb upstream 12308 true A07: 18443249-18455556 Brassica rapa FPsc
Brara.G02075 10.0kb upstream 10.0kb upstream 10000 false A07: 18443249-18453248 Brassica rapa FPsc
Brara.G02075 10.0kb downstream 10.0kb downstream 12308 true A07: 18453249-18465556 Brassica rapa FPsc
Brara.G02075 10.0kb downstream 10.0kb downstream 10000 false A07: 18455557-18465556 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040878 5273 Angiosperm View MSA
122370985 5261 Brassicaceae View MSA
123830629 5264 Brassicales-Malvales View MSA
124340195 5266 SBM View MSA
124253761 5268 Malvidae View MSA
124067355 5270 Rosid View MSA
123751254 5271 Pentapetalae View MSA
122790171 5272 Eudicot View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier