Gene : Brara.G02076 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  2076
Name:  ? Brara.G02076 Secondary Identifier:  ? PAC:30633023
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02076 0.5kb upstream 0.5kb upstream 3803 true A07: 18460616-18464418 Brassica rapa FPsc
Brara.G02076 0.5kb upstream 0.5kb upstream 500 false A07: 18460616-18461115 Brassica rapa FPsc
Brara.G02076 0.5kb downstream 0.5kb downstream 3803 true A07: 18461116-18464918 Brassica rapa FPsc
Brara.G02076 0.5kb downstream 0.5kb downstream 500 false A07: 18464419-18464918 Brassica rapa FPsc
Brara.G02076 1.0kb upstream 1.0kb upstream 4303 true A07: 18460116-18464418 Brassica rapa FPsc
Brara.G02076 1.0kb upstream 1.0kb upstream 1000 false A07: 18460116-18461115 Brassica rapa FPsc
Brara.G02076 1.0kb downstream 1.0kb downstream 4303 true A07: 18461116-18465418 Brassica rapa FPsc
Brara.G02076 1.0kb downstream 1.0kb downstream 1000 false A07: 18464419-18465418 Brassica rapa FPsc
Brara.G02076 2.0kb upstream 2.0kb upstream 5303 true A07: 18459116-18464418 Brassica rapa FPsc
Brara.G02076 2.0kb upstream 2.0kb upstream 2000 false A07: 18459116-18461115 Brassica rapa FPsc
Brara.G02076 2.0kb downstream 2.0kb downstream 5303 true A07: 18461116-18466418 Brassica rapa FPsc
Brara.G02076 2.0kb downstream 2.0kb downstream 2000 false A07: 18464419-18466418 Brassica rapa FPsc
Brara.G02076 5.0kb upstream 5.0kb upstream 8303 true A07: 18456116-18464418 Brassica rapa FPsc
Brara.G02076 5.0kb upstream 5.0kb upstream 5000 false A07: 18456116-18461115 Brassica rapa FPsc
Brara.G02076 5.0kb downstream 5.0kb downstream 8303 true A07: 18461116-18469418 Brassica rapa FPsc
Brara.G02076 5.0kb downstream 5.0kb downstream 5000 false A07: 18464419-18469418 Brassica rapa FPsc
Brara.G02076 10.0kb upstream 10.0kb upstream 13303 true A07: 18451116-18464418 Brassica rapa FPsc
Brara.G02076 10.0kb upstream 10.0kb upstream 10000 false A07: 18451116-18461115 Brassica rapa FPsc
Brara.G02076 10.0kb downstream 10.0kb downstream 13303 true A07: 18461116-18474418 Brassica rapa FPsc
Brara.G02076 10.0kb downstream 10.0kb downstream 10000 false A07: 18464419-18474418 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360687 5261 Brassicaceae View MSA
123836882 5264 Brassicales-Malvales View MSA
124346127 5266 SBM View MSA
124243370 5268 Malvidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier