Gene : Brara.G02096 B. rapa FPsc v1.3

Defline:  (1 of 2) PTHR22942:SF37 - DNA REPAIR PROTEIN RECA HOMOLOG 1, CHLOROPLASTIC Genomic Order:  2096
Name:  ? Brara.G02096 Secondary Identifier:  ? PAC:30632957

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02096 0.5kb upstream 0.5kb upstream 3230 true A07: 18553453-18556682 Brassica rapa FPsc
Brara.G02096 0.5kb upstream 0.5kb upstream 500 false A07: 18553453-18553952 Brassica rapa FPsc
Brara.G02096 0.5kb downstream 0.5kb downstream 3230 true A07: 18553953-18557182 Brassica rapa FPsc
Brara.G02096 0.5kb downstream 0.5kb downstream 500 false A07: 18556683-18557182 Brassica rapa FPsc
Brara.G02096 1.0kb upstream 1.0kb upstream 3730 true A07: 18552953-18556682 Brassica rapa FPsc
Brara.G02096 1.0kb upstream 1.0kb upstream 1000 false A07: 18552953-18553952 Brassica rapa FPsc
Brara.G02096 1.0kb downstream 1.0kb downstream 3730 true A07: 18553953-18557682 Brassica rapa FPsc
Brara.G02096 1.0kb downstream 1.0kb downstream 1000 false A07: 18556683-18557682 Brassica rapa FPsc
Brara.G02096 2.0kb upstream 2.0kb upstream 4730 true A07: 18551953-18556682 Brassica rapa FPsc
Brara.G02096 2.0kb upstream 2.0kb upstream 2000 false A07: 18551953-18553952 Brassica rapa FPsc
Brara.G02096 2.0kb downstream 2.0kb downstream 4730 true A07: 18553953-18558682 Brassica rapa FPsc
Brara.G02096 2.0kb downstream 2.0kb downstream 2000 false A07: 18556683-18558682 Brassica rapa FPsc
Brara.G02096 5.0kb upstream 5.0kb upstream 7730 true A07: 18548953-18556682 Brassica rapa FPsc
Brara.G02096 5.0kb upstream 5.0kb upstream 5000 false A07: 18548953-18553952 Brassica rapa FPsc
Brara.G02096 5.0kb downstream 5.0kb downstream 7730 true A07: 18553953-18561682 Brassica rapa FPsc
Brara.G02096 5.0kb downstream 5.0kb downstream 5000 false A07: 18556683-18561682 Brassica rapa FPsc
Brara.G02096 10.0kb upstream 10.0kb upstream 12730 true A07: 18543953-18556682 Brassica rapa FPsc
Brara.G02096 10.0kb upstream 10.0kb upstream 10000 false A07: 18543953-18553952 Brassica rapa FPsc
Brara.G02096 10.0kb downstream 10.0kb downstream 12730 true A07: 18553953-18566682 Brassica rapa FPsc
Brara.G02096 10.0kb downstream 10.0kb downstream 10000 false A07: 18556683-18566682 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030734 5273 Angiosperm View MSA
122351287 5261 Brassicaceae Singleton cluster - no MSA
123790199 5264 Brassicales-Malvales Singleton cluster - no MSA
124288166 5266 SBM Singleton cluster - no MSA
124141728 5268 Malvidae Singleton cluster - no MSA
123868737 5270 Rosid Singleton cluster - no MSA
123453410 5271 Pentapetalae Singleton cluster - no MSA
122488875 5272 Eudicot Singleton cluster - no MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier