Gene : Brara.A03491 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase Genomic Order:  3491
Name:  ? Brara.A03491 Secondary Identifier:  ? PAC:30636203
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4261 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6118 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03491 0.5kb upstream 0.5kb upstream 4152 true A01: 28488921-28493072 Brassica rapa FPsc
Brara.A03491 0.5kb upstream 0.5kb upstream 500 false A01: 28492573-28493072 Brassica rapa FPsc
Brara.A03491 0.5kb downstream 0.5kb downstream 4152 true A01: 28488421-28492572 Brassica rapa FPsc
Brara.A03491 0.5kb downstream 0.5kb downstream 500 false A01: 28488421-28488920 Brassica rapa FPsc
Brara.A03491 1.0kb upstream 1.0kb upstream 4652 true A01: 28488921-28493572 Brassica rapa FPsc
Brara.A03491 1.0kb upstream 1.0kb upstream 1000 false A01: 28492573-28493572 Brassica rapa FPsc
Brara.A03491 1.0kb downstream 1.0kb downstream 4652 true A01: 28487921-28492572 Brassica rapa FPsc
Brara.A03491 1.0kb downstream 1.0kb downstream 1000 false A01: 28487921-28488920 Brassica rapa FPsc
Brara.A03491 2.0kb upstream 2.0kb upstream 5652 true A01: 28488921-28494572 Brassica rapa FPsc
Brara.A03491 2.0kb upstream 2.0kb upstream 2000 false A01: 28492573-28494572 Brassica rapa FPsc
Brara.A03491 2.0kb downstream 2.0kb downstream 5652 true A01: 28486921-28492572 Brassica rapa FPsc
Brara.A03491 2.0kb downstream 2.0kb downstream 2000 false A01: 28486921-28488920 Brassica rapa FPsc
Brara.A03491 5.0kb upstream 5.0kb upstream 8652 true A01: 28488921-28497572 Brassica rapa FPsc
Brara.A03491 5.0kb upstream 5.0kb upstream 5000 false A01: 28492573-28497572 Brassica rapa FPsc
Brara.A03491 5.0kb downstream 5.0kb downstream 8652 true A01: 28483921-28492572 Brassica rapa FPsc
Brara.A03491 5.0kb downstream 5.0kb downstream 5000 false A01: 28483921-28488920 Brassica rapa FPsc
Brara.A03491 10.0kb upstream 10.0kb upstream 13652 true A01: 28488921-28502572 Brassica rapa FPsc
Brara.A03491 10.0kb upstream 10.0kb upstream 10000 false A01: 28492573-28502572 Brassica rapa FPsc
Brara.A03491 10.0kb downstream 10.0kb downstream 13652 true A01: 28478921-28492572 Brassica rapa FPsc
Brara.A03491 10.0kb downstream 10.0kb downstream 10000 false A01: 28478921-28488920 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352130 5261 Brassicaceae Singleton cluster - no MSA
123842754 5264 Brassicales-Malvales View MSA
124323749 5266 SBM View MSA
124169613 5268 Malvidae View MSA
124061929 5270 Rosid View MSA
123753233 5271 Pentapetalae View MSA
122790544 5272 Eudicot View MSA
122048322 5273 Angiosperm View MSA
121344080 5274 Embryophyte View MSA
123427532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier