Gene : Brara.G02117 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG0250//KOG0978 - DNA repair protein RAD18 (SMC family protein) // E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  2117
Name:  ? Brara.G02117 Secondary Identifier:  ? PAC:30634014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02117 0.5kb upstream 0.5kb upstream 5759 true A07: 18672015-18677773 Brassica rapa FPsc
Brara.G02117 0.5kb upstream 0.5kb upstream 500 false A07: 18672015-18672514 Brassica rapa FPsc
Brara.G02117 0.5kb downstream 0.5kb downstream 5759 true A07: 18672515-18678273 Brassica rapa FPsc
Brara.G02117 0.5kb downstream 0.5kb downstream 500 false A07: 18677774-18678273 Brassica rapa FPsc
Brara.G02117 1.0kb upstream 1.0kb upstream 6259 true A07: 18671515-18677773 Brassica rapa FPsc
Brara.G02117 1.0kb upstream 1.0kb upstream 1000 false A07: 18671515-18672514 Brassica rapa FPsc
Brara.G02117 1.0kb downstream 1.0kb downstream 6259 true A07: 18672515-18678773 Brassica rapa FPsc
Brara.G02117 1.0kb downstream 1.0kb downstream 1000 false A07: 18677774-18678773 Brassica rapa FPsc
Brara.G02117 2.0kb upstream 2.0kb upstream 7259 true A07: 18670515-18677773 Brassica rapa FPsc
Brara.G02117 2.0kb upstream 2.0kb upstream 2000 false A07: 18670515-18672514 Brassica rapa FPsc
Brara.G02117 2.0kb downstream 2.0kb downstream 7259 true A07: 18672515-18679773 Brassica rapa FPsc
Brara.G02117 2.0kb downstream 2.0kb downstream 2000 false A07: 18677774-18679773 Brassica rapa FPsc
Brara.G02117 5.0kb upstream 5.0kb upstream 10259 true A07: 18667515-18677773 Brassica rapa FPsc
Brara.G02117 5.0kb upstream 5.0kb upstream 5000 false A07: 18667515-18672514 Brassica rapa FPsc
Brara.G02117 5.0kb downstream 5.0kb downstream 10259 true A07: 18672515-18682773 Brassica rapa FPsc
Brara.G02117 5.0kb downstream 5.0kb downstream 5000 false A07: 18677774-18682773 Brassica rapa FPsc
Brara.G02117 10.0kb upstream 10.0kb upstream 15259 true A07: 18662515-18677773 Brassica rapa FPsc
Brara.G02117 10.0kb upstream 10.0kb upstream 10000 false A07: 18662515-18672514 Brassica rapa FPsc
Brara.G02117 10.0kb downstream 10.0kb downstream 15259 true A07: 18672515-18687773 Brassica rapa FPsc
Brara.G02117 10.0kb downstream 10.0kb downstream 10000 false A07: 18677774-18687773 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375456 5261 Brassicaceae View MSA
123833019 5264 Brassicales-Malvales View MSA
124345606 5266 SBM View MSA
124238407 5268 Malvidae View MSA
124068908 5270 Rosid View MSA
123737284 5271 Pentapetalae View MSA
122789700 5272 Eudicot View MSA
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier