Gene : Brara.A03505 B. rapa FPsc v1.3
Defline:  (1 of 4) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  3505
Name:  ? Brara.A03505 Secondary Identifier:  ? PAC:30638269
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ILEUSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03505 0.5kb upstream 0.5kb upstream 3756 true A01: 28581599-28585354 Brassica rapa FPsc
Brara.A03505 0.5kb upstream 0.5kb upstream 500 false A01: 28581599-28582098 Brassica rapa FPsc
Brara.A03505 0.5kb downstream 0.5kb downstream 3756 true A01: 28582099-28585854 Brassica rapa FPsc
Brara.A03505 0.5kb downstream 0.5kb downstream 500 false A01: 28585355-28585854 Brassica rapa FPsc
Brara.A03505 1.0kb upstream 1.0kb upstream 4256 true A01: 28581099-28585354 Brassica rapa FPsc
Brara.A03505 1.0kb upstream 1.0kb upstream 1000 false A01: 28581099-28582098 Brassica rapa FPsc
Brara.A03505 1.0kb downstream 1.0kb downstream 4256 true A01: 28582099-28586354 Brassica rapa FPsc
Brara.A03505 1.0kb downstream 1.0kb downstream 1000 false A01: 28585355-28586354 Brassica rapa FPsc
Brara.A03505 2.0kb upstream 2.0kb upstream 5256 true A01: 28580099-28585354 Brassica rapa FPsc
Brara.A03505 2.0kb upstream 2.0kb upstream 2000 false A01: 28580099-28582098 Brassica rapa FPsc
Brara.A03505 2.0kb downstream 2.0kb downstream 5256 true A01: 28582099-28587354 Brassica rapa FPsc
Brara.A03505 2.0kb downstream 2.0kb downstream 2000 false A01: 28585355-28587354 Brassica rapa FPsc
Brara.A03505 5.0kb upstream 5.0kb upstream 8256 true A01: 28577099-28585354 Brassica rapa FPsc
Brara.A03505 5.0kb upstream 5.0kb upstream 5000 false A01: 28577099-28582098 Brassica rapa FPsc
Brara.A03505 5.0kb downstream 5.0kb downstream 8256 true A01: 28582099-28590354 Brassica rapa FPsc
Brara.A03505 5.0kb downstream 5.0kb downstream 5000 false A01: 28585355-28590354 Brassica rapa FPsc
Brara.A03505 10.0kb upstream 10.0kb upstream 13256 true A01: 28572099-28585354 Brassica rapa FPsc
Brara.A03505 10.0kb upstream 10.0kb upstream 10000 false A01: 28572099-28582098 Brassica rapa FPsc
Brara.A03505 10.0kb downstream 10.0kb downstream 13256 true A01: 28582099-28595354 Brassica rapa FPsc
Brara.A03505 10.0kb downstream 10.0kb downstream 10000 false A01: 28585355-28595354 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122377421 5261 Brassicaceae View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier