Gene : Brara.A03295 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR32166:SF20 - HAT TRANSPOSON SUPERFAMILY PROTEIN Genomic Order:  3295
Name:  ? Brara.A03295 Secondary Identifier:  ? PAC:30636168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03295 0.5kb upstream 0.5kb upstream 2243 true A01: 27353709-27355951 Brassica rapa FPsc
Brara.A03295 0.5kb upstream 0.5kb upstream 500 false A01: 27353709-27354208 Brassica rapa FPsc
Brara.A03295 0.5kb downstream 0.5kb downstream 2243 true A01: 27354209-27356451 Brassica rapa FPsc
Brara.A03295 0.5kb downstream 0.5kb downstream 500 false A01: 27355952-27356451 Brassica rapa FPsc
Brara.A03295 1.0kb upstream 1.0kb upstream 2743 true A01: 27353209-27355951 Brassica rapa FPsc
Brara.A03295 1.0kb upstream 1.0kb upstream 1000 false A01: 27353209-27354208 Brassica rapa FPsc
Brara.A03295 1.0kb downstream 1.0kb downstream 2743 true A01: 27354209-27356951 Brassica rapa FPsc
Brara.A03295 1.0kb downstream 1.0kb downstream 1000 false A01: 27355952-27356951 Brassica rapa FPsc
Brara.A03295 2.0kb upstream 2.0kb upstream 3743 true A01: 27352209-27355951 Brassica rapa FPsc
Brara.A03295 2.0kb upstream 2.0kb upstream 2000 false A01: 27352209-27354208 Brassica rapa FPsc
Brara.A03295 2.0kb downstream 2.0kb downstream 3743 true A01: 27354209-27357951 Brassica rapa FPsc
Brara.A03295 2.0kb downstream 2.0kb downstream 2000 false A01: 27355952-27357951 Brassica rapa FPsc
Brara.A03295 5.0kb upstream 5.0kb upstream 6743 true A01: 27349209-27355951 Brassica rapa FPsc
Brara.A03295 5.0kb upstream 5.0kb upstream 5000 false A01: 27349209-27354208 Brassica rapa FPsc
Brara.A03295 5.0kb downstream 5.0kb downstream 6743 true A01: 27354209-27360951 Brassica rapa FPsc
Brara.A03295 5.0kb downstream 5.0kb downstream 5000 false A01: 27355952-27360951 Brassica rapa FPsc
Brara.A03295 10.0kb upstream 10.0kb upstream 11743 true A01: 27344209-27355951 Brassica rapa FPsc
Brara.A03295 10.0kb upstream 10.0kb upstream 10000 false A01: 27344209-27354208 Brassica rapa FPsc
Brara.A03295 10.0kb downstream 10.0kb downstream 11743 true A01: 27354209-27365951 Brassica rapa FPsc
Brara.A03295 10.0kb downstream 10.0kb downstream 10000 false A01: 27355952-27365951 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380911 5261 Brassicaceae View MSA
123832953 5264 Brassicales-Malvales View MSA
124321835 5266 SBM View MSA
124242529 5268 Malvidae View MSA
124050464 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier