Gene : Brara.G01889 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11941:SF48 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL Genomic Order:  1889
Name:  ? Brara.G01889 Secondary Identifier:  ? PAC:30632690
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7574 Brassica rapa FPsc pathologic  
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01889 0.5kb upstream 0.5kb upstream 4156 true A07: 17467066-17471221 Brassica rapa FPsc
Brara.G01889 0.5kb upstream 0.5kb upstream 500 false A07: 17470722-17471221 Brassica rapa FPsc
Brara.G01889 0.5kb downstream 0.5kb downstream 4156 true A07: 17466566-17470721 Brassica rapa FPsc
Brara.G01889 0.5kb downstream 0.5kb downstream 500 false A07: 17466566-17467065 Brassica rapa FPsc
Brara.G01889 1.0kb upstream 1.0kb upstream 4656 true A07: 17467066-17471721 Brassica rapa FPsc
Brara.G01889 1.0kb upstream 1.0kb upstream 1000 false A07: 17470722-17471721 Brassica rapa FPsc
Brara.G01889 1.0kb downstream 1.0kb downstream 4656 true A07: 17466066-17470721 Brassica rapa FPsc
Brara.G01889 1.0kb downstream 1.0kb downstream 1000 false A07: 17466066-17467065 Brassica rapa FPsc
Brara.G01889 2.0kb upstream 2.0kb upstream 5656 true A07: 17467066-17472721 Brassica rapa FPsc
Brara.G01889 2.0kb upstream 2.0kb upstream 2000 false A07: 17470722-17472721 Brassica rapa FPsc
Brara.G01889 2.0kb downstream 2.0kb downstream 5656 true A07: 17465066-17470721 Brassica rapa FPsc
Brara.G01889 2.0kb downstream 2.0kb downstream 2000 false A07: 17465066-17467065 Brassica rapa FPsc
Brara.G01889 5.0kb upstream 5.0kb upstream 8656 true A07: 17467066-17475721 Brassica rapa FPsc
Brara.G01889 5.0kb upstream 5.0kb upstream 5000 false A07: 17470722-17475721 Brassica rapa FPsc
Brara.G01889 5.0kb downstream 5.0kb downstream 8656 true A07: 17462066-17470721 Brassica rapa FPsc
Brara.G01889 5.0kb downstream 5.0kb downstream 5000 false A07: 17462066-17467065 Brassica rapa FPsc
Brara.G01889 10.0kb upstream 10.0kb upstream 13656 true A07: 17467066-17480721 Brassica rapa FPsc
Brara.G01889 10.0kb upstream 10.0kb upstream 10000 false A07: 17470722-17480721 Brassica rapa FPsc
Brara.G01889 10.0kb downstream 10.0kb downstream 13656 true A07: 17457066-17470721 Brassica rapa FPsc
Brara.G01889 10.0kb downstream 10.0kb downstream 10000 false A07: 17457066-17467065 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372333 5261 Brassicaceae View MSA
123827340 5264 Brassicales-Malvales View MSA
124337150 5266 SBM View MSA
124239754 5268 Malvidae View MSA
124065753 5270 Rosid View MSA
123742938 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier