Gene : Brara.G01897 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.2.1.1 - Transketolase / Glycoaldehyde transferase Genomic Order:  1897
Name:  ? Brara.G01897 Secondary Identifier:  ? PAC:30634948
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc NONOXIPENT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PENTOSE-P-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01897 0.5kb upstream 0.5kb upstream 2294 true A07: 17527781-17530074 Brassica rapa FPsc
Brara.G01897 0.5kb upstream 0.5kb upstream 500 false A07: 17527781-17528280 Brassica rapa FPsc
Brara.G01897 0.5kb downstream 0.5kb downstream 2294 true A07: 17528281-17530574 Brassica rapa FPsc
Brara.G01897 0.5kb downstream 0.5kb downstream 500 false A07: 17530075-17530574 Brassica rapa FPsc
Brara.G01897 1.0kb upstream 1.0kb upstream 2794 true A07: 17527281-17530074 Brassica rapa FPsc
Brara.G01897 1.0kb upstream 1.0kb upstream 1000 false A07: 17527281-17528280 Brassica rapa FPsc
Brara.G01897 1.0kb downstream 1.0kb downstream 2794 true A07: 17528281-17531074 Brassica rapa FPsc
Brara.G01897 1.0kb downstream 1.0kb downstream 1000 false A07: 17530075-17531074 Brassica rapa FPsc
Brara.G01897 2.0kb upstream 2.0kb upstream 3794 true A07: 17526281-17530074 Brassica rapa FPsc
Brara.G01897 2.0kb upstream 2.0kb upstream 2000 false A07: 17526281-17528280 Brassica rapa FPsc
Brara.G01897 2.0kb downstream 2.0kb downstream 3794 true A07: 17528281-17532074 Brassica rapa FPsc
Brara.G01897 2.0kb downstream 2.0kb downstream 2000 false A07: 17530075-17532074 Brassica rapa FPsc
Brara.G01897 5.0kb upstream 5.0kb upstream 6794 true A07: 17523281-17530074 Brassica rapa FPsc
Brara.G01897 5.0kb upstream 5.0kb upstream 5000 false A07: 17523281-17528280 Brassica rapa FPsc
Brara.G01897 5.0kb downstream 5.0kb downstream 6794 true A07: 17528281-17535074 Brassica rapa FPsc
Brara.G01897 5.0kb downstream 5.0kb downstream 5000 false A07: 17530075-17535074 Brassica rapa FPsc
Brara.G01897 10.0kb upstream 10.0kb upstream 11794 true A07: 17518281-17530074 Brassica rapa FPsc
Brara.G01897 10.0kb upstream 10.0kb upstream 10000 false A07: 17518281-17528280 Brassica rapa FPsc
Brara.G01897 10.0kb downstream 10.0kb downstream 11794 true A07: 17528281-17540074 Brassica rapa FPsc
Brara.G01897 10.0kb downstream 10.0kb downstream 10000 false A07: 17530075-17540074 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027550 5273 Angiosperm View MSA
122360111 5261 Brassicaceae View MSA
123842534 5264 Brassicales-Malvales View MSA
124323576 5266 SBM View MSA
124251132 5268 Malvidae View MSA
123952572 5270 Rosid View MSA
123530299 5271 Pentapetalae View MSA
122565265 5272 Eudicot View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier