Gene : Brara.G01817 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  1817
Name:  ? Brara.G01817 Secondary Identifier:  ? PAC:30633825
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01817 0.5kb upstream 0.5kb upstream 5242 true A07: 17124757-17129998 Brassica rapa FPsc
Brara.G01817 0.5kb upstream 0.5kb upstream 500 false A07: 17124757-17125256 Brassica rapa FPsc
Brara.G01817 0.5kb downstream 0.5kb downstream 5242 true A07: 17125257-17130498 Brassica rapa FPsc
Brara.G01817 0.5kb downstream 0.5kb downstream 500 false A07: 17129999-17130498 Brassica rapa FPsc
Brara.G01817 1.0kb upstream 1.0kb upstream 5742 true A07: 17124257-17129998 Brassica rapa FPsc
Brara.G01817 1.0kb upstream 1.0kb upstream 1000 false A07: 17124257-17125256 Brassica rapa FPsc
Brara.G01817 1.0kb downstream 1.0kb downstream 5742 true A07: 17125257-17130998 Brassica rapa FPsc
Brara.G01817 1.0kb downstream 1.0kb downstream 1000 false A07: 17129999-17130998 Brassica rapa FPsc
Brara.G01817 2.0kb upstream 2.0kb upstream 6742 true A07: 17123257-17129998 Brassica rapa FPsc
Brara.G01817 2.0kb upstream 2.0kb upstream 2000 false A07: 17123257-17125256 Brassica rapa FPsc
Brara.G01817 2.0kb downstream 2.0kb downstream 6742 true A07: 17125257-17131998 Brassica rapa FPsc
Brara.G01817 2.0kb downstream 2.0kb downstream 2000 false A07: 17129999-17131998 Brassica rapa FPsc
Brara.G01817 5.0kb upstream 5.0kb upstream 9742 true A07: 17120257-17129998 Brassica rapa FPsc
Brara.G01817 5.0kb upstream 5.0kb upstream 5000 false A07: 17120257-17125256 Brassica rapa FPsc
Brara.G01817 5.0kb downstream 5.0kb downstream 9742 true A07: 17125257-17134998 Brassica rapa FPsc
Brara.G01817 5.0kb downstream 5.0kb downstream 5000 false A07: 17129999-17134998 Brassica rapa FPsc
Brara.G01817 10.0kb upstream 10.0kb upstream 14742 true A07: 17115257-17129998 Brassica rapa FPsc
Brara.G01817 10.0kb upstream 10.0kb upstream 10000 false A07: 17115257-17125256 Brassica rapa FPsc
Brara.G01817 10.0kb downstream 10.0kb downstream 14742 true A07: 17125257-17139998 Brassica rapa FPsc
Brara.G01817 10.0kb downstream 10.0kb downstream 10000 false A07: 17129999-17139998 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364573 5261 Brassicaceae View MSA
123838020 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier