Gene : Brara.G01829 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  1829
Name:  ? Brara.G01829 Secondary Identifier:  ? PAC:30633176
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6773 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01829 0.5kb upstream 0.5kb upstream 11300 true A07: 17184923-17196222 Brassica rapa FPsc
Brara.G01829 0.5kb upstream 0.5kb upstream 500 false A07: 17184923-17185422 Brassica rapa FPsc
Brara.G01829 0.5kb downstream 0.5kb downstream 11300 true A07: 17185423-17196722 Brassica rapa FPsc
Brara.G01829 0.5kb downstream 0.5kb downstream 500 false A07: 17196223-17196722 Brassica rapa FPsc
Brara.G01829 1.0kb upstream 1.0kb upstream 11800 true A07: 17184423-17196222 Brassica rapa FPsc
Brara.G01829 1.0kb upstream 1.0kb upstream 1000 false A07: 17184423-17185422 Brassica rapa FPsc
Brara.G01829 1.0kb downstream 1.0kb downstream 11800 true A07: 17185423-17197222 Brassica rapa FPsc
Brara.G01829 1.0kb downstream 1.0kb downstream 1000 false A07: 17196223-17197222 Brassica rapa FPsc
Brara.G01829 2.0kb upstream 2.0kb upstream 12800 true A07: 17183423-17196222 Brassica rapa FPsc
Brara.G01829 2.0kb upstream 2.0kb upstream 2000 false A07: 17183423-17185422 Brassica rapa FPsc
Brara.G01829 2.0kb downstream 2.0kb downstream 12800 true A07: 17185423-17198222 Brassica rapa FPsc
Brara.G01829 2.0kb downstream 2.0kb downstream 2000 false A07: 17196223-17198222 Brassica rapa FPsc
Brara.G01829 5.0kb upstream 5.0kb upstream 15800 true A07: 17180423-17196222 Brassica rapa FPsc
Brara.G01829 5.0kb upstream 5.0kb upstream 5000 false A07: 17180423-17185422 Brassica rapa FPsc
Brara.G01829 5.0kb downstream 5.0kb downstream 15800 true A07: 17185423-17201222 Brassica rapa FPsc
Brara.G01829 5.0kb downstream 5.0kb downstream 5000 false A07: 17196223-17201222 Brassica rapa FPsc
Brara.G01829 10.0kb upstream 10.0kb upstream 20800 true A07: 17175423-17196222 Brassica rapa FPsc
Brara.G01829 10.0kb upstream 10.0kb upstream 10000 false A07: 17175423-17185422 Brassica rapa FPsc
Brara.G01829 10.0kb downstream 10.0kb downstream 20800 true A07: 17185423-17206222 Brassica rapa FPsc
Brara.G01829 10.0kb downstream 10.0kb downstream 10000 false A07: 17196223-17206222 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365522 5261 Brassicaceae View MSA
123839457 5264 Brassicales-Malvales View MSA
124345846 5266 SBM View MSA
124242779 5268 Malvidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier