Gene : Brara.A03201 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11353//PTHR11353:SF93 - CHAPERONIN Genomic Order:  3201
Name:  ? Brara.A03201 Secondary Identifier:  ? PAC:30639963
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03201 0.5kb upstream 0.5kb upstream 6779 true A01: 26790830-26797608 Brassica rapa FPsc
Brara.A03201 0.5kb upstream 0.5kb upstream 500 false A01: 26797109-26797608 Brassica rapa FPsc
Brara.A03201 0.5kb downstream 0.5kb downstream 6779 true A01: 26790330-26797108 Brassica rapa FPsc
Brara.A03201 0.5kb downstream 0.5kb downstream 500 false A01: 26790330-26790829 Brassica rapa FPsc
Brara.A03201 1.0kb upstream 1.0kb upstream 7279 true A01: 26790830-26798108 Brassica rapa FPsc
Brara.A03201 1.0kb upstream 1.0kb upstream 1000 false A01: 26797109-26798108 Brassica rapa FPsc
Brara.A03201 1.0kb downstream 1.0kb downstream 7279 true A01: 26789830-26797108 Brassica rapa FPsc
Brara.A03201 1.0kb downstream 1.0kb downstream 1000 false A01: 26789830-26790829 Brassica rapa FPsc
Brara.A03201 2.0kb upstream 2.0kb upstream 8279 true A01: 26790830-26799108 Brassica rapa FPsc
Brara.A03201 2.0kb upstream 2.0kb upstream 2000 false A01: 26797109-26799108 Brassica rapa FPsc
Brara.A03201 2.0kb downstream 2.0kb downstream 8279 true A01: 26788830-26797108 Brassica rapa FPsc
Brara.A03201 2.0kb downstream 2.0kb downstream 2000 false A01: 26788830-26790829 Brassica rapa FPsc
Brara.A03201 5.0kb upstream 5.0kb upstream 11279 true A01: 26790830-26802108 Brassica rapa FPsc
Brara.A03201 5.0kb upstream 5.0kb upstream 5000 false A01: 26797109-26802108 Brassica rapa FPsc
Brara.A03201 5.0kb downstream 5.0kb downstream 11279 true A01: 26785830-26797108 Brassica rapa FPsc
Brara.A03201 5.0kb downstream 5.0kb downstream 5000 false A01: 26785830-26790829 Brassica rapa FPsc
Brara.A03201 10.0kb upstream 10.0kb upstream 16279 true A01: 26790830-26807108 Brassica rapa FPsc
Brara.A03201 10.0kb upstream 10.0kb upstream 10000 false A01: 26797109-26807108 Brassica rapa FPsc
Brara.A03201 10.0kb downstream 10.0kb downstream 16279 true A01: 26780830-26797108 Brassica rapa FPsc
Brara.A03201 10.0kb downstream 10.0kb downstream 10000 false A01: 26780830-26790829 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353043 5261 Brassicaceae Singleton cluster - no MSA
123791674 5264 Brassicales-Malvales Singleton cluster - no MSA
124289582 5266 SBM Singleton cluster - no MSA
124251287 5268 Malvidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier