Gene : Brara.G01848 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR10584:SF168 - F14I3.3 PROTEIN-RELATED Genomic Order:  1848
Name:  ? Brara.G01848 Secondary Identifier:  ? PAC:30635723
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3801 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4101 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-621 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01848 0.5kb upstream 0.5kb upstream 2038 true A07: 17263622-17265659 Brassica rapa FPsc
Brara.G01848 0.5kb upstream 0.5kb upstream 500 false A07: 17263622-17264121 Brassica rapa FPsc
Brara.G01848 0.5kb downstream 0.5kb downstream 2038 true A07: 17264122-17266159 Brassica rapa FPsc
Brara.G01848 0.5kb downstream 0.5kb downstream 500 false A07: 17265660-17266159 Brassica rapa FPsc
Brara.G01848 1.0kb upstream 1.0kb upstream 2538 true A07: 17263122-17265659 Brassica rapa FPsc
Brara.G01848 1.0kb upstream 1.0kb upstream 1000 false A07: 17263122-17264121 Brassica rapa FPsc
Brara.G01848 1.0kb downstream 1.0kb downstream 2538 true A07: 17264122-17266659 Brassica rapa FPsc
Brara.G01848 1.0kb downstream 1.0kb downstream 1000 false A07: 17265660-17266659 Brassica rapa FPsc
Brara.G01848 2.0kb upstream 2.0kb upstream 3538 true A07: 17262122-17265659 Brassica rapa FPsc
Brara.G01848 2.0kb upstream 2.0kb upstream 2000 false A07: 17262122-17264121 Brassica rapa FPsc
Brara.G01848 2.0kb downstream 2.0kb downstream 3538 true A07: 17264122-17267659 Brassica rapa FPsc
Brara.G01848 2.0kb downstream 2.0kb downstream 2000 false A07: 17265660-17267659 Brassica rapa FPsc
Brara.G01848 5.0kb upstream 5.0kb upstream 6538 true A07: 17259122-17265659 Brassica rapa FPsc
Brara.G01848 5.0kb upstream 5.0kb upstream 5000 false A07: 17259122-17264121 Brassica rapa FPsc
Brara.G01848 5.0kb downstream 5.0kb downstream 6538 true A07: 17264122-17270659 Brassica rapa FPsc
Brara.G01848 5.0kb downstream 5.0kb downstream 5000 false A07: 17265660-17270659 Brassica rapa FPsc
Brara.G01848 10.0kb upstream 10.0kb upstream 11538 true A07: 17254122-17265659 Brassica rapa FPsc
Brara.G01848 10.0kb upstream 10.0kb upstream 10000 false A07: 17254122-17264121 Brassica rapa FPsc
Brara.G01848 10.0kb downstream 10.0kb downstream 11538 true A07: 17264122-17275659 Brassica rapa FPsc
Brara.G01848 10.0kb downstream 10.0kb downstream 10000 false A07: 17265660-17275659 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373282 5261 Brassicaceae View MSA
123840164 5264 Brassicales-Malvales View MSA
124345708 5266 SBM View MSA
124244290 5268 Malvidae View MSA
124067946 5270 Rosid View MSA
123739538 5271 Pentapetalae View MSA
122791305 5272 Eudicot View MSA
122050267 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier