Gene : Brara.G01727 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR14226 - NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER Genomic Order:  1727
Name:  ? Brara.G01727 Secondary Identifier:  ? PAC:30635171
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01727 0.5kb upstream 0.5kb upstream 3836 true A07: 16618137-16621972 Brassica rapa FPsc
Brara.G01727 0.5kb upstream 0.5kb upstream 500 false A07: 16621473-16621972 Brassica rapa FPsc
Brara.G01727 0.5kb downstream 0.5kb downstream 3836 true A07: 16617637-16621472 Brassica rapa FPsc
Brara.G01727 0.5kb downstream 0.5kb downstream 500 false A07: 16617637-16618136 Brassica rapa FPsc
Brara.G01727 1.0kb upstream 1.0kb upstream 4336 true A07: 16618137-16622472 Brassica rapa FPsc
Brara.G01727 1.0kb upstream 1.0kb upstream 1000 false A07: 16621473-16622472 Brassica rapa FPsc
Brara.G01727 1.0kb downstream 1.0kb downstream 4336 true A07: 16617137-16621472 Brassica rapa FPsc
Brara.G01727 1.0kb downstream 1.0kb downstream 1000 false A07: 16617137-16618136 Brassica rapa FPsc
Brara.G01727 2.0kb upstream 2.0kb upstream 5336 true A07: 16618137-16623472 Brassica rapa FPsc
Brara.G01727 2.0kb upstream 2.0kb upstream 2000 false A07: 16621473-16623472 Brassica rapa FPsc
Brara.G01727 2.0kb downstream 2.0kb downstream 5336 true A07: 16616137-16621472 Brassica rapa FPsc
Brara.G01727 2.0kb downstream 2.0kb downstream 2000 false A07: 16616137-16618136 Brassica rapa FPsc
Brara.G01727 5.0kb upstream 5.0kb upstream 8336 true A07: 16618137-16626472 Brassica rapa FPsc
Brara.G01727 5.0kb upstream 5.0kb upstream 5000 false A07: 16621473-16626472 Brassica rapa FPsc
Brara.G01727 5.0kb downstream 5.0kb downstream 8336 true A07: 16613137-16621472 Brassica rapa FPsc
Brara.G01727 5.0kb downstream 5.0kb downstream 5000 false A07: 16613137-16618136 Brassica rapa FPsc
Brara.G01727 10.0kb upstream 10.0kb upstream 13336 true A07: 16618137-16631472 Brassica rapa FPsc
Brara.G01727 10.0kb upstream 10.0kb upstream 10000 false A07: 16621473-16631472 Brassica rapa FPsc
Brara.G01727 10.0kb downstream 10.0kb downstream 13336 true A07: 16608137-16621472 Brassica rapa FPsc
Brara.G01727 10.0kb downstream 10.0kb downstream 10000 false A07: 16608137-16618136 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511051 5273 Angiosperm View MSA
122371600 5261 Brassicaceae View MSA
123800196 5264 Brassicales-Malvales View MSA
124297640 5266 SBM View MSA
124149474 5268 Malvidae View MSA
123875278 5270 Rosid View MSA
123459129 5271 Pentapetalae View MSA
122494524 5272 Eudicot View MSA
120784119 5274 Embryophyte View MSA
122826054 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier