Gene : Brara.G01561 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR33317:SF1 - POLYNUCLEOTIDYL TRANSFERASE/ RIBONUCLEASE H-LIKE PROTEIN Genomic Order:  1561
Name:  ? Brara.G01561 Secondary Identifier:  ? PAC:30631972
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01561 0.5kb upstream 0.5kb upstream 1816 true A07: 15582178-15583993 Brassica rapa FPsc
Brara.G01561 0.5kb upstream 0.5kb upstream 500 false A07: 15583494-15583993 Brassica rapa FPsc
Brara.G01561 0.5kb downstream 0.5kb downstream 1816 true A07: 15581678-15583493 Brassica rapa FPsc
Brara.G01561 0.5kb downstream 0.5kb downstream 500 false A07: 15581678-15582177 Brassica rapa FPsc
Brara.G01561 1.0kb upstream 1.0kb upstream 2316 true A07: 15582178-15584493 Brassica rapa FPsc
Brara.G01561 1.0kb upstream 1.0kb upstream 1000 false A07: 15583494-15584493 Brassica rapa FPsc
Brara.G01561 1.0kb downstream 1.0kb downstream 2316 true A07: 15581178-15583493 Brassica rapa FPsc
Brara.G01561 1.0kb downstream 1.0kb downstream 1000 false A07: 15581178-15582177 Brassica rapa FPsc
Brara.G01561 2.0kb upstream 2.0kb upstream 3316 true A07: 15582178-15585493 Brassica rapa FPsc
Brara.G01561 2.0kb upstream 2.0kb upstream 2000 false A07: 15583494-15585493 Brassica rapa FPsc
Brara.G01561 2.0kb downstream 2.0kb downstream 3316 true A07: 15580178-15583493 Brassica rapa FPsc
Brara.G01561 2.0kb downstream 2.0kb downstream 2000 false A07: 15580178-15582177 Brassica rapa FPsc
Brara.G01561 5.0kb upstream 5.0kb upstream 6316 true A07: 15582178-15588493 Brassica rapa FPsc
Brara.G01561 5.0kb upstream 5.0kb upstream 5000 false A07: 15583494-15588493 Brassica rapa FPsc
Brara.G01561 5.0kb downstream 5.0kb downstream 6316 true A07: 15577178-15583493 Brassica rapa FPsc
Brara.G01561 5.0kb downstream 5.0kb downstream 5000 false A07: 15577178-15582177 Brassica rapa FPsc
Brara.G01561 10.0kb upstream 10.0kb upstream 11316 true A07: 15582178-15593493 Brassica rapa FPsc
Brara.G01561 10.0kb upstream 10.0kb upstream 10000 false A07: 15583494-15593493 Brassica rapa FPsc
Brara.G01561 10.0kb downstream 10.0kb downstream 11316 true A07: 15572178-15583493 Brassica rapa FPsc
Brara.G01561 10.0kb downstream 10.0kb downstream 10000 false A07: 15572178-15582177 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351062 5261 Brassicaceae Singleton cluster - no MSA
123789999 5264 Brassicales-Malvales Singleton cluster - no MSA
124287975 5266 SBM Singleton cluster - no MSA
124141574 5268 Malvidae Singleton cluster - no MSA
124067279 5270 Rosid View MSA
123746369 5271 Pentapetalae View MSA
122785614 5272 Eudicot View MSA
122048036 5273 Angiosperm View MSA
121349861 5274 Embryophyte View MSA
123381473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier