Gene : Brara.D01743 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2 Genomic Order:  1743
Name:  ? Brara.D01743 Secondary Identifier:  ? PAC:30621783
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5271 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01743 0.5kb upstream 0.5kb upstream 4470 true A04: 15220551-15225020 Brassica rapa FPsc
Brara.D01743 0.5kb upstream 0.5kb upstream 500 false A04: 15224521-15225020 Brassica rapa FPsc
Brara.D01743 0.5kb downstream 0.5kb downstream 4470 true A04: 15220051-15224520 Brassica rapa FPsc
Brara.D01743 0.5kb downstream 0.5kb downstream 500 false A04: 15220051-15220550 Brassica rapa FPsc
Brara.D01743 1.0kb upstream 1.0kb upstream 4970 true A04: 15220551-15225520 Brassica rapa FPsc
Brara.D01743 1.0kb upstream 1.0kb upstream 1000 false A04: 15224521-15225520 Brassica rapa FPsc
Brara.D01743 1.0kb downstream 1.0kb downstream 4970 true A04: 15219551-15224520 Brassica rapa FPsc
Brara.D01743 1.0kb downstream 1.0kb downstream 1000 false A04: 15219551-15220550 Brassica rapa FPsc
Brara.D01743 2.0kb upstream 2.0kb upstream 5970 true A04: 15220551-15226520 Brassica rapa FPsc
Brara.D01743 2.0kb upstream 2.0kb upstream 2000 false A04: 15224521-15226520 Brassica rapa FPsc
Brara.D01743 2.0kb downstream 2.0kb downstream 5970 true A04: 15218551-15224520 Brassica rapa FPsc
Brara.D01743 2.0kb downstream 2.0kb downstream 2000 false A04: 15218551-15220550 Brassica rapa FPsc
Brara.D01743 5.0kb upstream 5.0kb upstream 8970 true A04: 15220551-15229520 Brassica rapa FPsc
Brara.D01743 5.0kb upstream 5.0kb upstream 5000 false A04: 15224521-15229520 Brassica rapa FPsc
Brara.D01743 5.0kb downstream 5.0kb downstream 8970 true A04: 15215551-15224520 Brassica rapa FPsc
Brara.D01743 5.0kb downstream 5.0kb downstream 5000 false A04: 15215551-15220550 Brassica rapa FPsc
Brara.D01743 10.0kb upstream 10.0kb upstream 13970 true A04: 15220551-15234520 Brassica rapa FPsc
Brara.D01743 10.0kb upstream 10.0kb upstream 10000 false A04: 15224521-15234520 Brassica rapa FPsc
Brara.D01743 10.0kb downstream 10.0kb downstream 13970 true A04: 15210551-15224520 Brassica rapa FPsc
Brara.D01743 10.0kb downstream 10.0kb downstream 10000 false A04: 15210551-15220550 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372552 5261 Brassicaceae View MSA
123831515 5264 Brassicales-Malvales View MSA
124341542 5266 SBM View MSA
124242424 5268 Malvidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier