Gene : Brara.G01512 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  1512
Name:  ? Brara.G01512 Secondary Identifier:  ? PAC:30635187
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6842 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01512 0.5kb upstream 0.5kb upstream 2082 true A07: 15207241-15209322 Brassica rapa FPsc
Brara.G01512 0.5kb upstream 0.5kb upstream 500 false A07: 15208823-15209322 Brassica rapa FPsc
Brara.G01512 0.5kb downstream 0.5kb downstream 2082 true A07: 15206741-15208822 Brassica rapa FPsc
Brara.G01512 0.5kb downstream 0.5kb downstream 500 false A07: 15206741-15207240 Brassica rapa FPsc
Brara.G01512 1.0kb upstream 1.0kb upstream 2582 true A07: 15207241-15209822 Brassica rapa FPsc
Brara.G01512 1.0kb upstream 1.0kb upstream 1000 false A07: 15208823-15209822 Brassica rapa FPsc
Brara.G01512 1.0kb downstream 1.0kb downstream 2582 true A07: 15206241-15208822 Brassica rapa FPsc
Brara.G01512 1.0kb downstream 1.0kb downstream 1000 false A07: 15206241-15207240 Brassica rapa FPsc
Brara.G01512 2.0kb upstream 2.0kb upstream 3582 true A07: 15207241-15210822 Brassica rapa FPsc
Brara.G01512 2.0kb upstream 2.0kb upstream 2000 false A07: 15208823-15210822 Brassica rapa FPsc
Brara.G01512 2.0kb downstream 2.0kb downstream 3582 true A07: 15205241-15208822 Brassica rapa FPsc
Brara.G01512 2.0kb downstream 2.0kb downstream 2000 false A07: 15205241-15207240 Brassica rapa FPsc
Brara.G01512 5.0kb upstream 5.0kb upstream 6582 true A07: 15207241-15213822 Brassica rapa FPsc
Brara.G01512 5.0kb upstream 5.0kb upstream 5000 false A07: 15208823-15213822 Brassica rapa FPsc
Brara.G01512 5.0kb downstream 5.0kb downstream 6582 true A07: 15202241-15208822 Brassica rapa FPsc
Brara.G01512 5.0kb downstream 5.0kb downstream 5000 false A07: 15202241-15207240 Brassica rapa FPsc
Brara.G01512 10.0kb upstream 10.0kb upstream 11582 true A07: 15207241-15218822 Brassica rapa FPsc
Brara.G01512 10.0kb upstream 10.0kb upstream 10000 false A07: 15208823-15218822 Brassica rapa FPsc
Brara.G01512 10.0kb downstream 10.0kb downstream 11582 true A07: 15197241-15208822 Brassica rapa FPsc
Brara.G01512 10.0kb downstream 10.0kb downstream 10000 false A07: 15197241-15207240 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122374727 5261 Brassicaceae View MSA
123835708 5264 Brassicales-Malvales View MSA
124339383 5266 SBM View MSA
124240290 5268 Malvidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier