Gene : Brara.A03158 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR33398:SF2 - 30S RIBOSOMAL PROTEIN S20, CHLOROPLASTIC Genomic Order:  3158
Name:  ? Brara.A03158 Secondary Identifier:  ? PAC:30639028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03158 0.5kb upstream 0.5kb upstream 1781 true A01: 26484481-26486261 Brassica rapa FPsc
Brara.A03158 0.5kb upstream 0.5kb upstream 500 false A01: 26485762-26486261 Brassica rapa FPsc
Brara.A03158 0.5kb downstream 0.5kb downstream 1781 true A01: 26483981-26485761 Brassica rapa FPsc
Brara.A03158 0.5kb downstream 0.5kb downstream 500 false A01: 26483981-26484480 Brassica rapa FPsc
Brara.A03158 1.0kb upstream 1.0kb upstream 2281 true A01: 26484481-26486761 Brassica rapa FPsc
Brara.A03158 1.0kb upstream 1.0kb upstream 1000 false A01: 26485762-26486761 Brassica rapa FPsc
Brara.A03158 1.0kb downstream 1.0kb downstream 2281 true A01: 26483481-26485761 Brassica rapa FPsc
Brara.A03158 1.0kb downstream 1.0kb downstream 1000 false A01: 26483481-26484480 Brassica rapa FPsc
Brara.A03158 2.0kb upstream 2.0kb upstream 3281 true A01: 26484481-26487761 Brassica rapa FPsc
Brara.A03158 2.0kb upstream 2.0kb upstream 2000 false A01: 26485762-26487761 Brassica rapa FPsc
Brara.A03158 2.0kb downstream 2.0kb downstream 3281 true A01: 26482481-26485761 Brassica rapa FPsc
Brara.A03158 2.0kb downstream 2.0kb downstream 2000 false A01: 26482481-26484480 Brassica rapa FPsc
Brara.A03158 5.0kb upstream 5.0kb upstream 6281 true A01: 26484481-26490761 Brassica rapa FPsc
Brara.A03158 5.0kb upstream 5.0kb upstream 5000 false A01: 26485762-26490761 Brassica rapa FPsc
Brara.A03158 5.0kb downstream 5.0kb downstream 6281 true A01: 26479481-26485761 Brassica rapa FPsc
Brara.A03158 5.0kb downstream 5.0kb downstream 5000 false A01: 26479481-26484480 Brassica rapa FPsc
Brara.A03158 10.0kb upstream 10.0kb upstream 11281 true A01: 26484481-26495761 Brassica rapa FPsc
Brara.A03158 10.0kb upstream 10.0kb upstream 10000 false A01: 26485762-26495761 Brassica rapa FPsc
Brara.A03158 10.0kb downstream 10.0kb downstream 11281 true A01: 26474481-26485761 Brassica rapa FPsc
Brara.A03158 10.0kb downstream 10.0kb downstream 10000 false A01: 26474481-26484480 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
122352807 5261 Brassicaceae Singleton cluster - no MSA
123791482 5264 Brassicales-Malvales Singleton cluster - no MSA
124289396 5266 SBM Singleton cluster - no MSA
124142740 5268 Malvidae Singleton cluster - no MSA
124065268 5270 Rosid View MSA
123738976 5271 Pentapetalae View MSA
122785943 5272 Eudicot View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier