Gene : Brara.G03173 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  3173
Name:  ? Brara.G03173 Secondary Identifier:  ? PAC:30634937
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5063 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5064 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03173 0.5kb upstream 0.5kb upstream 2633 true A07: 24696995-24699627 Brassica rapa FPsc
Brara.G03173 0.5kb upstream 0.5kb upstream 500 false A07: 24699128-24699627 Brassica rapa FPsc
Brara.G03173 0.5kb downstream 0.5kb downstream 2633 true A07: 24696495-24699127 Brassica rapa FPsc
Brara.G03173 0.5kb downstream 0.5kb downstream 500 false A07: 24696495-24696994 Brassica rapa FPsc
Brara.G03173 1.0kb upstream 1.0kb upstream 3133 true A07: 24696995-24700127 Brassica rapa FPsc
Brara.G03173 1.0kb upstream 1.0kb upstream 1000 false A07: 24699128-24700127 Brassica rapa FPsc
Brara.G03173 1.0kb downstream 1.0kb downstream 3133 true A07: 24695995-24699127 Brassica rapa FPsc
Brara.G03173 1.0kb downstream 1.0kb downstream 1000 false A07: 24695995-24696994 Brassica rapa FPsc
Brara.G03173 2.0kb upstream 2.0kb upstream 4133 true A07: 24696995-24701127 Brassica rapa FPsc
Brara.G03173 2.0kb upstream 2.0kb upstream 2000 false A07: 24699128-24701127 Brassica rapa FPsc
Brara.G03173 2.0kb downstream 2.0kb downstream 4133 true A07: 24694995-24699127 Brassica rapa FPsc
Brara.G03173 2.0kb downstream 2.0kb downstream 2000 false A07: 24694995-24696994 Brassica rapa FPsc
Brara.G03173 5.0kb upstream 5.0kb upstream 7133 true A07: 24696995-24704127 Brassica rapa FPsc
Brara.G03173 5.0kb upstream 5.0kb upstream 5000 false A07: 24699128-24704127 Brassica rapa FPsc
Brara.G03173 5.0kb downstream 5.0kb downstream 7133 true A07: 24691995-24699127 Brassica rapa FPsc
Brara.G03173 5.0kb downstream 5.0kb downstream 5000 false A07: 24691995-24696994 Brassica rapa FPsc
Brara.G03173 10.0kb upstream 10.0kb upstream 12133 true A07: 24696995-24709127 Brassica rapa FPsc
Brara.G03173 10.0kb upstream 10.0kb upstream 10000 false A07: 24699128-24709127 Brassica rapa FPsc
Brara.G03173 10.0kb downstream 10.0kb downstream 12133 true A07: 24686995-24699127 Brassica rapa FPsc
Brara.G03173 10.0kb downstream 10.0kb downstream 10000 false A07: 24686995-24696994 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368864 5261 Brassicaceae View MSA
123831426 5264 Brassicales-Malvales View MSA
124345987 5266 SBM View MSA
124242880 5268 Malvidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier