Gene : Brara.A03857 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12510 - TROPONIN C-AKIN-1 PROTEIN Genomic Order:  3857
Name:  ? Brara.A03857 Secondary Identifier:  ? PAC:30639136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03857 0.5kb upstream 0.5kb upstream 1061 true A01: 30490201-30491261 Brassica rapa FPsc
Brara.A03857 0.5kb upstream 0.5kb upstream 500 false A01: 30490762-30491261 Brassica rapa FPsc
Brara.A03857 0.5kb downstream 0.5kb downstream 1061 true A01: 30489701-30490761 Brassica rapa FPsc
Brara.A03857 0.5kb downstream 0.5kb downstream 500 false A01: 30489701-30490200 Brassica rapa FPsc
Brara.A03857 1.0kb upstream 1.0kb upstream 1561 true A01: 30490201-30491761 Brassica rapa FPsc
Brara.A03857 1.0kb upstream 1.0kb upstream 1000 false A01: 30490762-30491761 Brassica rapa FPsc
Brara.A03857 1.0kb downstream 1.0kb downstream 1561 true A01: 30489201-30490761 Brassica rapa FPsc
Brara.A03857 1.0kb downstream 1.0kb downstream 1000 false A01: 30489201-30490200 Brassica rapa FPsc
Brara.A03857 2.0kb upstream 2.0kb upstream 2561 true A01: 30490201-30492761 Brassica rapa FPsc
Brara.A03857 2.0kb upstream 2.0kb upstream 2000 false A01: 30490762-30492761 Brassica rapa FPsc
Brara.A03857 2.0kb downstream 2.0kb downstream 2561 true A01: 30488201-30490761 Brassica rapa FPsc
Brara.A03857 2.0kb downstream 2.0kb downstream 2000 false A01: 30488201-30490200 Brassica rapa FPsc
Brara.A03857 5.0kb upstream 5.0kb upstream 5561 true A01: 30490201-30495761 Brassica rapa FPsc
Brara.A03857 5.0kb upstream 5.0kb upstream 5000 false A01: 30490762-30495761 Brassica rapa FPsc
Brara.A03857 5.0kb downstream 5.0kb downstream 5561 true A01: 30485201-30490761 Brassica rapa FPsc
Brara.A03857 5.0kb downstream 5.0kb downstream 5000 false A01: 30485201-30490200 Brassica rapa FPsc
Brara.A03857 10.0kb upstream 10.0kb upstream 10561 true A01: 30490201-30500761 Brassica rapa FPsc
Brara.A03857 10.0kb upstream 10.0kb upstream 10000 false A01: 30490762-30500761 Brassica rapa FPsc
Brara.A03857 10.0kb downstream 10.0kb downstream 10561 true A01: 30480201-30490761 Brassica rapa FPsc
Brara.A03857 10.0kb downstream 10.0kb downstream 10000 false A01: 30480201-30490200 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379797 5261 Brassicaceae View MSA
123836280 5264 Brassicales-Malvales View MSA
124340697 5266 SBM View MSA
124246677 5268 Malvidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier