Gene : Brara.G02980 B. rapa FPsc v1.3
Defline:  (1 of 5) 2.6.1.27 - Tryptophan transaminase / Tryptophan aminotransferase Genomic Order:  2980
Name:  ? Brara.G02980 Secondary Identifier:  ? PAC:30634036
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWYDQC-4 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02980 0.5kb upstream 0.5kb upstream 3089 true A07: 23692662-23695750 Brassica rapa FPsc
Brara.G02980 0.5kb upstream 0.5kb upstream 500 false A07: 23692662-23693161 Brassica rapa FPsc
Brara.G02980 0.5kb downstream 0.5kb downstream 3089 true A07: 23693162-23696250 Brassica rapa FPsc
Brara.G02980 0.5kb downstream 0.5kb downstream 500 false A07: 23695751-23696250 Brassica rapa FPsc
Brara.G02980 1.0kb upstream 1.0kb upstream 3589 true A07: 23692162-23695750 Brassica rapa FPsc
Brara.G02980 1.0kb upstream 1.0kb upstream 1000 false A07: 23692162-23693161 Brassica rapa FPsc
Brara.G02980 1.0kb downstream 1.0kb downstream 3589 true A07: 23693162-23696750 Brassica rapa FPsc
Brara.G02980 1.0kb downstream 1.0kb downstream 1000 false A07: 23695751-23696750 Brassica rapa FPsc
Brara.G02980 2.0kb upstream 2.0kb upstream 4589 true A07: 23691162-23695750 Brassica rapa FPsc
Brara.G02980 2.0kb upstream 2.0kb upstream 2000 false A07: 23691162-23693161 Brassica rapa FPsc
Brara.G02980 2.0kb downstream 2.0kb downstream 4589 true A07: 23693162-23697750 Brassica rapa FPsc
Brara.G02980 2.0kb downstream 2.0kb downstream 2000 false A07: 23695751-23697750 Brassica rapa FPsc
Brara.G02980 5.0kb upstream 5.0kb upstream 7589 true A07: 23688162-23695750 Brassica rapa FPsc
Brara.G02980 5.0kb upstream 5.0kb upstream 5000 false A07: 23688162-23693161 Brassica rapa FPsc
Brara.G02980 5.0kb downstream 5.0kb downstream 7589 true A07: 23693162-23700750 Brassica rapa FPsc
Brara.G02980 5.0kb downstream 5.0kb downstream 5000 false A07: 23695751-23700750 Brassica rapa FPsc
Brara.G02980 10.0kb upstream 10.0kb upstream 12589 true A07: 23683162-23695750 Brassica rapa FPsc
Brara.G02980 10.0kb upstream 10.0kb upstream 10000 false A07: 23683162-23693161 Brassica rapa FPsc
Brara.G02980 10.0kb downstream 10.0kb downstream 12589 true A07: 23693162-23705750 Brassica rapa FPsc
Brara.G02980 10.0kb downstream 10.0kb downstream 10000 false A07: 23695751-23705750 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791878 5273 Angiosperm View MSA
122365028 5261 Brassicaceae View MSA
123841509 5264 Brassicales-Malvales View MSA
124344840 5266 SBM View MSA
124240904 5268 Malvidae View MSA
124063214 5270 Rosid View MSA
123745663 5271 Pentapetalae View MSA
122794997 5272 Eudicot View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier