Gene : Brara.G03020 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  3020
Name:  ? Brara.G03020 Secondary Identifier:  ? PAC:30633945
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03020 0.5kb upstream 0.5kb upstream 3670 true A07: 23911695-23915364 Brassica rapa FPsc
Brara.G03020 0.5kb upstream 0.5kb upstream 500 false A07: 23914865-23915364 Brassica rapa FPsc
Brara.G03020 0.5kb downstream 0.5kb downstream 3670 true A07: 23911195-23914864 Brassica rapa FPsc
Brara.G03020 0.5kb downstream 0.5kb downstream 500 false A07: 23911195-23911694 Brassica rapa FPsc
Brara.G03020 1.0kb upstream 1.0kb upstream 4170 true A07: 23911695-23915864 Brassica rapa FPsc
Brara.G03020 1.0kb upstream 1.0kb upstream 1000 false A07: 23914865-23915864 Brassica rapa FPsc
Brara.G03020 1.0kb downstream 1.0kb downstream 4170 true A07: 23910695-23914864 Brassica rapa FPsc
Brara.G03020 1.0kb downstream 1.0kb downstream 1000 false A07: 23910695-23911694 Brassica rapa FPsc
Brara.G03020 2.0kb upstream 2.0kb upstream 5170 true A07: 23911695-23916864 Brassica rapa FPsc
Brara.G03020 2.0kb upstream 2.0kb upstream 2000 false A07: 23914865-23916864 Brassica rapa FPsc
Brara.G03020 2.0kb downstream 2.0kb downstream 5170 true A07: 23909695-23914864 Brassica rapa FPsc
Brara.G03020 2.0kb downstream 2.0kb downstream 2000 false A07: 23909695-23911694 Brassica rapa FPsc
Brara.G03020 5.0kb upstream 5.0kb upstream 8170 true A07: 23911695-23919864 Brassica rapa FPsc
Brara.G03020 5.0kb upstream 5.0kb upstream 5000 false A07: 23914865-23919864 Brassica rapa FPsc
Brara.G03020 5.0kb downstream 5.0kb downstream 8170 true A07: 23906695-23914864 Brassica rapa FPsc
Brara.G03020 5.0kb downstream 5.0kb downstream 5000 false A07: 23906695-23911694 Brassica rapa FPsc
Brara.G03020 10.0kb upstream 10.0kb upstream 13170 true A07: 23911695-23924864 Brassica rapa FPsc
Brara.G03020 10.0kb upstream 10.0kb upstream 10000 false A07: 23914865-23924864 Brassica rapa FPsc
Brara.G03020 10.0kb downstream 10.0kb downstream 13170 true A07: 23901695-23914864 Brassica rapa FPsc
Brara.G03020 10.0kb downstream 10.0kb downstream 10000 false A07: 23901695-23911694 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371158 5261 Brassicaceae View MSA
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier