Gene : Brara.G03039 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  3039
Name:  ? Brara.G03039 Secondary Identifier:  ? PAC:30632733
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7409 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03039 0.5kb upstream 0.5kb upstream 2451 true A07: 24008164-24010614 Brassica rapa FPsc
Brara.G03039 0.5kb upstream 0.5kb upstream 500 false A07: 24010115-24010614 Brassica rapa FPsc
Brara.G03039 0.5kb downstream 0.5kb downstream 2451 true A07: 24007664-24010114 Brassica rapa FPsc
Brara.G03039 0.5kb downstream 0.5kb downstream 500 false A07: 24007664-24008163 Brassica rapa FPsc
Brara.G03039 1.0kb upstream 1.0kb upstream 2951 true A07: 24008164-24011114 Brassica rapa FPsc
Brara.G03039 1.0kb upstream 1.0kb upstream 1000 false A07: 24010115-24011114 Brassica rapa FPsc
Brara.G03039 1.0kb downstream 1.0kb downstream 2951 true A07: 24007164-24010114 Brassica rapa FPsc
Brara.G03039 1.0kb downstream 1.0kb downstream 1000 false A07: 24007164-24008163 Brassica rapa FPsc
Brara.G03039 2.0kb upstream 2.0kb upstream 3951 true A07: 24008164-24012114 Brassica rapa FPsc
Brara.G03039 2.0kb upstream 2.0kb upstream 2000 false A07: 24010115-24012114 Brassica rapa FPsc
Brara.G03039 2.0kb downstream 2.0kb downstream 3951 true A07: 24006164-24010114 Brassica rapa FPsc
Brara.G03039 2.0kb downstream 2.0kb downstream 2000 false A07: 24006164-24008163 Brassica rapa FPsc
Brara.G03039 5.0kb upstream 5.0kb upstream 6951 true A07: 24008164-24015114 Brassica rapa FPsc
Brara.G03039 5.0kb upstream 5.0kb upstream 5000 false A07: 24010115-24015114 Brassica rapa FPsc
Brara.G03039 5.0kb downstream 5.0kb downstream 6951 true A07: 24003164-24010114 Brassica rapa FPsc
Brara.G03039 5.0kb downstream 5.0kb downstream 5000 false A07: 24003164-24008163 Brassica rapa FPsc
Brara.G03039 10.0kb upstream 10.0kb upstream 11951 true A07: 24008164-24020114 Brassica rapa FPsc
Brara.G03039 10.0kb upstream 10.0kb upstream 10000 false A07: 24010115-24020114 Brassica rapa FPsc
Brara.G03039 10.0kb downstream 10.0kb downstream 11951 true A07: 23998164-24010114 Brassica rapa FPsc
Brara.G03039 10.0kb downstream 10.0kb downstream 10000 false A07: 23998164-24008163 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367757 5261 Brassicaceae View MSA
123834207 5264 Brassicales-Malvales View MSA
124341346 5266 SBM View MSA
124240087 5268 Malvidae View MSA
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier