Gene : Brara.G02853 B. rapa FPsc v1.3
Defline:  (1 of 3) PF09011 - HMG-box domain (HMG_box_2) Genomic Order:  2853
Name:  ? Brara.G02853 Secondary Identifier:  ? PAC:30632173
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02853 0.5kb upstream 0.5kb upstream 2181 true A07: 22935504-22937684 Brassica rapa FPsc
Brara.G02853 0.5kb upstream 0.5kb upstream 500 false A07: 22937185-22937684 Brassica rapa FPsc
Brara.G02853 0.5kb downstream 0.5kb downstream 2181 true A07: 22935004-22937184 Brassica rapa FPsc
Brara.G02853 0.5kb downstream 0.5kb downstream 500 false A07: 22935004-22935503 Brassica rapa FPsc
Brara.G02853 1.0kb upstream 1.0kb upstream 2681 true A07: 22935504-22938184 Brassica rapa FPsc
Brara.G02853 1.0kb upstream 1.0kb upstream 1000 false A07: 22937185-22938184 Brassica rapa FPsc
Brara.G02853 1.0kb downstream 1.0kb downstream 2681 true A07: 22934504-22937184 Brassica rapa FPsc
Brara.G02853 1.0kb downstream 1.0kb downstream 1000 false A07: 22934504-22935503 Brassica rapa FPsc
Brara.G02853 2.0kb upstream 2.0kb upstream 3681 true A07: 22935504-22939184 Brassica rapa FPsc
Brara.G02853 2.0kb upstream 2.0kb upstream 2000 false A07: 22937185-22939184 Brassica rapa FPsc
Brara.G02853 2.0kb downstream 2.0kb downstream 3681 true A07: 22933504-22937184 Brassica rapa FPsc
Brara.G02853 2.0kb downstream 2.0kb downstream 2000 false A07: 22933504-22935503 Brassica rapa FPsc
Brara.G02853 5.0kb upstream 5.0kb upstream 6681 true A07: 22935504-22942184 Brassica rapa FPsc
Brara.G02853 5.0kb upstream 5.0kb upstream 5000 false A07: 22937185-22942184 Brassica rapa FPsc
Brara.G02853 5.0kb downstream 5.0kb downstream 6681 true A07: 22930504-22937184 Brassica rapa FPsc
Brara.G02853 5.0kb downstream 5.0kb downstream 5000 false A07: 22930504-22935503 Brassica rapa FPsc
Brara.G02853 10.0kb upstream 10.0kb upstream 11681 true A07: 22935504-22947184 Brassica rapa FPsc
Brara.G02853 10.0kb upstream 10.0kb upstream 10000 false A07: 22937185-22947184 Brassica rapa FPsc
Brara.G02853 10.0kb downstream 10.0kb downstream 11681 true A07: 22925504-22937184 Brassica rapa FPsc
Brara.G02853 10.0kb downstream 10.0kb downstream 10000 false A07: 22925504-22935503 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372688 5261 Brassicaceae View MSA
123833572 5264 Brassicales-Malvales View MSA
124337620 5266 SBM View MSA
124240629 5268 Malvidae View MSA
124064616 5270 Rosid View MSA
123751442 5271 Pentapetalae View MSA
122787834 5272 Eudicot View MSA
122046803 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier