Gene : Brara.A03826 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  3826
Name:  ? Brara.A03826 Secondary Identifier:  ? PAC:30636738
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03826 0.5kb upstream 0.5kb upstream 4150 true A01: 30330339-30334488 Brassica rapa FPsc
Brara.A03826 0.5kb upstream 0.5kb upstream 500 false A01: 30333989-30334488 Brassica rapa FPsc
Brara.A03826 0.5kb downstream 0.5kb downstream 4150 true A01: 30329839-30333988 Brassica rapa FPsc
Brara.A03826 0.5kb downstream 0.5kb downstream 500 false A01: 30329839-30330338 Brassica rapa FPsc
Brara.A03826 1.0kb upstream 1.0kb upstream 4650 true A01: 30330339-30334988 Brassica rapa FPsc
Brara.A03826 1.0kb upstream 1.0kb upstream 1000 false A01: 30333989-30334988 Brassica rapa FPsc
Brara.A03826 1.0kb downstream 1.0kb downstream 4650 true A01: 30329339-30333988 Brassica rapa FPsc
Brara.A03826 1.0kb downstream 1.0kb downstream 1000 false A01: 30329339-30330338 Brassica rapa FPsc
Brara.A03826 2.0kb upstream 2.0kb upstream 5650 true A01: 30330339-30335988 Brassica rapa FPsc
Brara.A03826 2.0kb upstream 2.0kb upstream 2000 false A01: 30333989-30335988 Brassica rapa FPsc
Brara.A03826 2.0kb downstream 2.0kb downstream 5650 true A01: 30328339-30333988 Brassica rapa FPsc
Brara.A03826 2.0kb downstream 2.0kb downstream 2000 false A01: 30328339-30330338 Brassica rapa FPsc
Brara.A03826 5.0kb upstream 5.0kb upstream 8650 true A01: 30330339-30338988 Brassica rapa FPsc
Brara.A03826 5.0kb upstream 5.0kb upstream 5000 false A01: 30333989-30338988 Brassica rapa FPsc
Brara.A03826 5.0kb downstream 5.0kb downstream 8650 true A01: 30325339-30333988 Brassica rapa FPsc
Brara.A03826 5.0kb downstream 5.0kb downstream 5000 false A01: 30325339-30330338 Brassica rapa FPsc
Brara.A03826 10.0kb upstream 10.0kb upstream 13650 true A01: 30330339-30343988 Brassica rapa FPsc
Brara.A03826 10.0kb upstream 10.0kb upstream 10000 false A01: 30333989-30343988 Brassica rapa FPsc
Brara.A03826 10.0kb downstream 10.0kb downstream 13650 true A01: 30320339-30333988 Brassica rapa FPsc
Brara.A03826 10.0kb downstream 10.0kb downstream 10000 false A01: 30320339-30330338 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381591 5261 Brassicaceae View MSA
123841075 5264 Brassicales-Malvales View MSA
124339513 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier