Gene : Brara.A03819 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  3819
Name:  ? Brara.A03819 Secondary Identifier:  ? PAC:30636301
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03819 0.5kb upstream 0.5kb upstream 2822 true A01: 30273602-30276423 Brassica rapa FPsc
Brara.A03819 0.5kb upstream 0.5kb upstream 500 false A01: 30273602-30274101 Brassica rapa FPsc
Brara.A03819 0.5kb downstream 0.5kb downstream 2822 true A01: 30274102-30276923 Brassica rapa FPsc
Brara.A03819 0.5kb downstream 0.5kb downstream 500 false A01: 30276424-30276923 Brassica rapa FPsc
Brara.A03819 1.0kb upstream 1.0kb upstream 3322 true A01: 30273102-30276423 Brassica rapa FPsc
Brara.A03819 1.0kb upstream 1.0kb upstream 1000 false A01: 30273102-30274101 Brassica rapa FPsc
Brara.A03819 1.0kb downstream 1.0kb downstream 3322 true A01: 30274102-30277423 Brassica rapa FPsc
Brara.A03819 1.0kb downstream 1.0kb downstream 1000 false A01: 30276424-30277423 Brassica rapa FPsc
Brara.A03819 2.0kb upstream 2.0kb upstream 4322 true A01: 30272102-30276423 Brassica rapa FPsc
Brara.A03819 2.0kb upstream 2.0kb upstream 2000 false A01: 30272102-30274101 Brassica rapa FPsc
Brara.A03819 2.0kb downstream 2.0kb downstream 4322 true A01: 30274102-30278423 Brassica rapa FPsc
Brara.A03819 2.0kb downstream 2.0kb downstream 2000 false A01: 30276424-30278423 Brassica rapa FPsc
Brara.A03819 5.0kb upstream 5.0kb upstream 7322 true A01: 30269102-30276423 Brassica rapa FPsc
Brara.A03819 5.0kb upstream 5.0kb upstream 5000 false A01: 30269102-30274101 Brassica rapa FPsc
Brara.A03819 5.0kb downstream 5.0kb downstream 7322 true A01: 30274102-30281423 Brassica rapa FPsc
Brara.A03819 5.0kb downstream 5.0kb downstream 5000 false A01: 30276424-30281423 Brassica rapa FPsc
Brara.A03819 10.0kb upstream 10.0kb upstream 12322 true A01: 30264102-30276423 Brassica rapa FPsc
Brara.A03819 10.0kb upstream 10.0kb upstream 10000 false A01: 30264102-30274101 Brassica rapa FPsc
Brara.A03819 10.0kb downstream 10.0kb downstream 12322 true A01: 30274102-30286423 Brassica rapa FPsc
Brara.A03819 10.0kb downstream 10.0kb downstream 10000 false A01: 30276424-30286423 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368867 5261 Brassicaceae View MSA
123829970 5264 Brassicales-Malvales View MSA
124341631 5266 SBM View MSA
124240411 5268 Malvidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier