Gene : Brara.A03833 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.7.7.9 - UTP--glucose-1-phosphate uridylyltransferase / UDP-glucose pyrophosphorylase Genomic Order:  3833
Name:  ? Brara.A03833 Secondary Identifier:  ? PAC:30640199
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3801 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6527 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7343 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03833 0.5kb upstream 0.5kb upstream 4697 true A01: 30357312-30362008 Brassica rapa FPsc
Brara.A03833 0.5kb upstream 0.5kb upstream 500 false A01: 30357312-30357811 Brassica rapa FPsc
Brara.A03833 0.5kb downstream 0.5kb downstream 4697 true A01: 30357812-30362508 Brassica rapa FPsc
Brara.A03833 0.5kb downstream 0.5kb downstream 500 false A01: 30362009-30362508 Brassica rapa FPsc
Brara.A03833 1.0kb upstream 1.0kb upstream 5197 true A01: 30356812-30362008 Brassica rapa FPsc
Brara.A03833 1.0kb upstream 1.0kb upstream 1000 false A01: 30356812-30357811 Brassica rapa FPsc
Brara.A03833 1.0kb downstream 1.0kb downstream 5197 true A01: 30357812-30363008 Brassica rapa FPsc
Brara.A03833 1.0kb downstream 1.0kb downstream 1000 false A01: 30362009-30363008 Brassica rapa FPsc
Brara.A03833 2.0kb upstream 2.0kb upstream 6197 true A01: 30355812-30362008 Brassica rapa FPsc
Brara.A03833 2.0kb upstream 2.0kb upstream 2000 false A01: 30355812-30357811 Brassica rapa FPsc
Brara.A03833 2.0kb downstream 2.0kb downstream 6197 true A01: 30357812-30364008 Brassica rapa FPsc
Brara.A03833 2.0kb downstream 2.0kb downstream 2000 false A01: 30362009-30364008 Brassica rapa FPsc
Brara.A03833 5.0kb upstream 5.0kb upstream 9197 true A01: 30352812-30362008 Brassica rapa FPsc
Brara.A03833 5.0kb upstream 5.0kb upstream 5000 false A01: 30352812-30357811 Brassica rapa FPsc
Brara.A03833 5.0kb downstream 5.0kb downstream 9197 true A01: 30357812-30367008 Brassica rapa FPsc
Brara.A03833 5.0kb downstream 5.0kb downstream 5000 false A01: 30362009-30367008 Brassica rapa FPsc
Brara.A03833 10.0kb upstream 10.0kb upstream 14197 true A01: 30347812-30362008 Brassica rapa FPsc
Brara.A03833 10.0kb upstream 10.0kb upstream 10000 false A01: 30347812-30357811 Brassica rapa FPsc
Brara.A03833 10.0kb downstream 10.0kb downstream 14197 true A01: 30357812-30372008 Brassica rapa FPsc
Brara.A03833 10.0kb downstream 10.0kb downstream 10000 false A01: 30362009-30372008 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353105 5261 Brassicaceae Singleton cluster - no MSA
123791727 5264 Brassicales-Malvales Singleton cluster - no MSA
124289632 5266 SBM Singleton cluster - no MSA
124142942 5268 Malvidae Singleton cluster - no MSA
123869736 5270 Rosid Singleton cluster - no MSA
123454249 5271 Pentapetalae Singleton cluster - no MSA
122489702 5272 Eudicot Singleton cluster - no MSA
122045529 5273 Angiosperm View MSA
121350801 5274 Embryophyte View MSA
123428020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier