Gene : Brara.A03665 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.3.1.199//6.2.1.2 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  3665
Name:  ? Brara.A03665 Secondary Identifier:  ? PAC:30637275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5080 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5143 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5885 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6433 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6598 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6803 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7036 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7601 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7619 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03665 0.5kb upstream 0.5kb upstream 1622 true A01: 29479973-29481594 Brassica rapa FPsc
Brara.A03665 0.5kb upstream 0.5kb upstream 500 false A01: 29479973-29480472 Brassica rapa FPsc
Brara.A03665 0.5kb downstream 0.5kb downstream 1622 true A01: 29480473-29482094 Brassica rapa FPsc
Brara.A03665 0.5kb downstream 0.5kb downstream 500 false A01: 29481595-29482094 Brassica rapa FPsc
Brara.A03665 1.0kb upstream 1.0kb upstream 2122 true A01: 29479473-29481594 Brassica rapa FPsc
Brara.A03665 1.0kb upstream 1.0kb upstream 1000 false A01: 29479473-29480472 Brassica rapa FPsc
Brara.A03665 1.0kb downstream 1.0kb downstream 2122 true A01: 29480473-29482594 Brassica rapa FPsc
Brara.A03665 1.0kb downstream 1.0kb downstream 1000 false A01: 29481595-29482594 Brassica rapa FPsc
Brara.A03665 2.0kb upstream 2.0kb upstream 3122 true A01: 29478473-29481594 Brassica rapa FPsc
Brara.A03665 2.0kb upstream 2.0kb upstream 2000 false A01: 29478473-29480472 Brassica rapa FPsc
Brara.A03665 2.0kb downstream 2.0kb downstream 3122 true A01: 29480473-29483594 Brassica rapa FPsc
Brara.A03665 2.0kb downstream 2.0kb downstream 2000 false A01: 29481595-29483594 Brassica rapa FPsc
Brara.A03665 5.0kb upstream 5.0kb upstream 6122 true A01: 29475473-29481594 Brassica rapa FPsc
Brara.A03665 5.0kb upstream 5.0kb upstream 5000 false A01: 29475473-29480472 Brassica rapa FPsc
Brara.A03665 5.0kb downstream 5.0kb downstream 6122 true A01: 29480473-29486594 Brassica rapa FPsc
Brara.A03665 5.0kb downstream 5.0kb downstream 5000 false A01: 29481595-29486594 Brassica rapa FPsc
Brara.A03665 10.0kb upstream 10.0kb upstream 11122 true A01: 29470473-29481594 Brassica rapa FPsc
Brara.A03665 10.0kb upstream 10.0kb upstream 10000 false A01: 29470473-29480472 Brassica rapa FPsc
Brara.A03665 10.0kb downstream 10.0kb downstream 11122 true A01: 29480473-29491594 Brassica rapa FPsc
Brara.A03665 10.0kb downstream 10.0kb downstream 10000 false A01: 29481595-29491594 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359801 5261 Brassicaceae View MSA
123797637 5264 Brassicales-Malvales View MSA
124295355 5266 SBM View MSA
124147796 5268 Malvidae View MSA
123873923 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier