Gene : Brara.A03666 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11157:SF13 - PROTEIN ELO-8, ISOFORM A Genomic Order:  3666
Name:  ? Brara.A03666 Secondary Identifier:  ? PAC:30639086
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5080 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6433 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6598 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7036 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7601 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7619 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03666 0.5kb upstream 0.5kb upstream 1316 true A01: 29483216-29484531 Brassica rapa FPsc
Brara.A03666 0.5kb upstream 0.5kb upstream 500 false A01: 29483216-29483715 Brassica rapa FPsc
Brara.A03666 0.5kb downstream 0.5kb downstream 1316 true A01: 29483716-29485031 Brassica rapa FPsc
Brara.A03666 0.5kb downstream 0.5kb downstream 500 false A01: 29484532-29485031 Brassica rapa FPsc
Brara.A03666 1.0kb upstream 1.0kb upstream 1816 true A01: 29482716-29484531 Brassica rapa FPsc
Brara.A03666 1.0kb upstream 1.0kb upstream 1000 false A01: 29482716-29483715 Brassica rapa FPsc
Brara.A03666 1.0kb downstream 1.0kb downstream 1816 true A01: 29483716-29485531 Brassica rapa FPsc
Brara.A03666 1.0kb downstream 1.0kb downstream 1000 false A01: 29484532-29485531 Brassica rapa FPsc
Brara.A03666 2.0kb upstream 2.0kb upstream 2816 true A01: 29481716-29484531 Brassica rapa FPsc
Brara.A03666 2.0kb upstream 2.0kb upstream 2000 false A01: 29481716-29483715 Brassica rapa FPsc
Brara.A03666 2.0kb downstream 2.0kb downstream 2816 true A01: 29483716-29486531 Brassica rapa FPsc
Brara.A03666 2.0kb downstream 2.0kb downstream 2000 false A01: 29484532-29486531 Brassica rapa FPsc
Brara.A03666 5.0kb upstream 5.0kb upstream 5816 true A01: 29478716-29484531 Brassica rapa FPsc
Brara.A03666 5.0kb upstream 5.0kb upstream 5000 false A01: 29478716-29483715 Brassica rapa FPsc
Brara.A03666 5.0kb downstream 5.0kb downstream 5816 true A01: 29483716-29489531 Brassica rapa FPsc
Brara.A03666 5.0kb downstream 5.0kb downstream 5000 false A01: 29484532-29489531 Brassica rapa FPsc
Brara.A03666 10.0kb upstream 10.0kb upstream 10816 true A01: 29473716-29484531 Brassica rapa FPsc
Brara.A03666 10.0kb upstream 10.0kb upstream 10000 false A01: 29473716-29483715 Brassica rapa FPsc
Brara.A03666 10.0kb downstream 10.0kb downstream 10816 true A01: 29483716-29494531 Brassica rapa FPsc
Brara.A03666 10.0kb downstream 10.0kb downstream 10000 false A01: 29484532-29494531 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352823 5261 Brassicaceae Singleton cluster - no MSA
123791496 5264 Brassicales-Malvales Singleton cluster - no MSA
124289408 5266 SBM Singleton cluster - no MSA
124142750 5268 Malvidae Singleton cluster - no MSA
123869573 5270 Rosid Singleton cluster - no MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier