Gene : Brara.G02604 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE Genomic Order:  2604
Name:  ? Brara.G02604 Secondary Identifier:  ? PAC:30633532
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6902 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02604 0.5kb upstream 0.5kb upstream 8350 true A07: 21477011-21485360 Brassica rapa FPsc
Brara.G02604 0.5kb upstream 0.5kb upstream 500 false A07: 21477011-21477510 Brassica rapa FPsc
Brara.G02604 0.5kb downstream 0.5kb downstream 8350 true A07: 21477511-21485860 Brassica rapa FPsc
Brara.G02604 0.5kb downstream 0.5kb downstream 500 false A07: 21485361-21485860 Brassica rapa FPsc
Brara.G02604 1.0kb upstream 1.0kb upstream 8850 true A07: 21476511-21485360 Brassica rapa FPsc
Brara.G02604 1.0kb upstream 1.0kb upstream 1000 false A07: 21476511-21477510 Brassica rapa FPsc
Brara.G02604 1.0kb downstream 1.0kb downstream 8850 true A07: 21477511-21486360 Brassica rapa FPsc
Brara.G02604 1.0kb downstream 1.0kb downstream 1000 false A07: 21485361-21486360 Brassica rapa FPsc
Brara.G02604 2.0kb upstream 2.0kb upstream 9850 true A07: 21475511-21485360 Brassica rapa FPsc
Brara.G02604 2.0kb upstream 2.0kb upstream 2000 false A07: 21475511-21477510 Brassica rapa FPsc
Brara.G02604 2.0kb downstream 2.0kb downstream 9850 true A07: 21477511-21487360 Brassica rapa FPsc
Brara.G02604 2.0kb downstream 2.0kb downstream 2000 false A07: 21485361-21487360 Brassica rapa FPsc
Brara.G02604 5.0kb upstream 5.0kb upstream 12850 true A07: 21472511-21485360 Brassica rapa FPsc
Brara.G02604 5.0kb upstream 5.0kb upstream 5000 false A07: 21472511-21477510 Brassica rapa FPsc
Brara.G02604 5.0kb downstream 5.0kb downstream 12850 true A07: 21477511-21490360 Brassica rapa FPsc
Brara.G02604 5.0kb downstream 5.0kb downstream 5000 false A07: 21485361-21490360 Brassica rapa FPsc
Brara.G02604 10.0kb upstream 10.0kb upstream 17850 true A07: 21467511-21485360 Brassica rapa FPsc
Brara.G02604 10.0kb upstream 10.0kb upstream 10000 false A07: 21467511-21477510 Brassica rapa FPsc
Brara.G02604 10.0kb downstream 10.0kb downstream 17850 true A07: 21477511-21495360 Brassica rapa FPsc
Brara.G02604 10.0kb downstream 10.0kb downstream 10000 false A07: 21485361-21495360 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372069 5261 Brassicaceae View MSA
123829142 5264 Brassicales-Malvales View MSA
124337219 5266 SBM View MSA
124240714 5268 Malvidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier