Gene : Brara.G02619 B. rapa FPsc v1.3
Defline:  (1 of 5) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  2619
Name:  ? Brara.G02619 Secondary Identifier:  ? PAC:30634577
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6549 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02619 0.5kb upstream 0.5kb upstream 3774 true A07: 21549503-21553276 Brassica rapa FPsc
Brara.G02619 0.5kb upstream 0.5kb upstream 500 false A07: 21549503-21550002 Brassica rapa FPsc
Brara.G02619 0.5kb downstream 0.5kb downstream 3774 true A07: 21550003-21553776 Brassica rapa FPsc
Brara.G02619 0.5kb downstream 0.5kb downstream 500 false A07: 21553277-21553776 Brassica rapa FPsc
Brara.G02619 1.0kb upstream 1.0kb upstream 4274 true A07: 21549003-21553276 Brassica rapa FPsc
Brara.G02619 1.0kb upstream 1.0kb upstream 1000 false A07: 21549003-21550002 Brassica rapa FPsc
Brara.G02619 1.0kb downstream 1.0kb downstream 4274 true A07: 21550003-21554276 Brassica rapa FPsc
Brara.G02619 1.0kb downstream 1.0kb downstream 1000 false A07: 21553277-21554276 Brassica rapa FPsc
Brara.G02619 2.0kb upstream 2.0kb upstream 5274 true A07: 21548003-21553276 Brassica rapa FPsc
Brara.G02619 2.0kb upstream 2.0kb upstream 2000 false A07: 21548003-21550002 Brassica rapa FPsc
Brara.G02619 2.0kb downstream 2.0kb downstream 5274 true A07: 21550003-21555276 Brassica rapa FPsc
Brara.G02619 2.0kb downstream 2.0kb downstream 2000 false A07: 21553277-21555276 Brassica rapa FPsc
Brara.G02619 5.0kb upstream 5.0kb upstream 8274 true A07: 21545003-21553276 Brassica rapa FPsc
Brara.G02619 5.0kb upstream 5.0kb upstream 5000 false A07: 21545003-21550002 Brassica rapa FPsc
Brara.G02619 5.0kb downstream 5.0kb downstream 8274 true A07: 21550003-21558276 Brassica rapa FPsc
Brara.G02619 5.0kb downstream 5.0kb downstream 5000 false A07: 21553277-21558276 Brassica rapa FPsc
Brara.G02619 10.0kb upstream 10.0kb upstream 13274 true A07: 21540003-21553276 Brassica rapa FPsc
Brara.G02619 10.0kb upstream 10.0kb upstream 10000 false A07: 21540003-21550002 Brassica rapa FPsc
Brara.G02619 10.0kb downstream 10.0kb downstream 13274 true A07: 21550003-21563276 Brassica rapa FPsc
Brara.G02619 10.0kb downstream 10.0kb downstream 10000 false A07: 21553277-21563276 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375650 5261 Brassicaceae View MSA
123836810 5264 Brassicales-Malvales View MSA
124343936 5266 SBM View MSA
124253615 5268 Malvidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier