Gene : Brara.G02500 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR30523:SF6 - PHOSPHOENOLPYRUVATE CARBOXYLASE 4 Genomic Order:  2500
Name:  ? Brara.G02500 Secondary Identifier:  ? PAC:30635697
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6549 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc PWYQT-4429 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02500 0.5kb upstream 0.5kb upstream 5939 true A07: 20839920-20845858 Brassica rapa FPsc
Brara.G02500 0.5kb upstream 0.5kb upstream 500 false A07: 20839920-20840419 Brassica rapa FPsc
Brara.G02500 0.5kb downstream 0.5kb downstream 5939 true A07: 20840420-20846358 Brassica rapa FPsc
Brara.G02500 0.5kb downstream 0.5kb downstream 500 false A07: 20845859-20846358 Brassica rapa FPsc
Brara.G02500 1.0kb upstream 1.0kb upstream 6439 true A07: 20839420-20845858 Brassica rapa FPsc
Brara.G02500 1.0kb upstream 1.0kb upstream 1000 false A07: 20839420-20840419 Brassica rapa FPsc
Brara.G02500 1.0kb downstream 1.0kb downstream 6439 true A07: 20840420-20846858 Brassica rapa FPsc
Brara.G02500 1.0kb downstream 1.0kb downstream 1000 false A07: 20845859-20846858 Brassica rapa FPsc
Brara.G02500 2.0kb upstream 2.0kb upstream 7439 true A07: 20838420-20845858 Brassica rapa FPsc
Brara.G02500 2.0kb upstream 2.0kb upstream 2000 false A07: 20838420-20840419 Brassica rapa FPsc
Brara.G02500 2.0kb downstream 2.0kb downstream 7439 true A07: 20840420-20847858 Brassica rapa FPsc
Brara.G02500 2.0kb downstream 2.0kb downstream 2000 false A07: 20845859-20847858 Brassica rapa FPsc
Brara.G02500 5.0kb upstream 5.0kb upstream 10439 true A07: 20835420-20845858 Brassica rapa FPsc
Brara.G02500 5.0kb upstream 5.0kb upstream 5000 false A07: 20835420-20840419 Brassica rapa FPsc
Brara.G02500 5.0kb downstream 5.0kb downstream 10439 true A07: 20840420-20850858 Brassica rapa FPsc
Brara.G02500 5.0kb downstream 5.0kb downstream 5000 false A07: 20845859-20850858 Brassica rapa FPsc
Brara.G02500 10.0kb upstream 10.0kb upstream 15439 true A07: 20830420-20845858 Brassica rapa FPsc
Brara.G02500 10.0kb upstream 10.0kb upstream 10000 false A07: 20830420-20840419 Brassica rapa FPsc
Brara.G02500 10.0kb downstream 10.0kb downstream 15439 true A07: 20840420-20855858 Brassica rapa FPsc
Brara.G02500 10.0kb downstream 10.0kb downstream 10000 false A07: 20845859-20855858 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370088 5261 Brassicaceae View MSA
123836867 5264 Brassicales-Malvales View MSA
124343843 5266 SBM View MSA
124239165 5268 Malvidae View MSA
124063566 5270 Rosid View MSA
123739033 5271 Pentapetalae View MSA
122792339 5272 Eudicot View MSA
122047821 5273 Angiosperm View MSA
123429064 5275 Viridiplantae View MSA
121344816 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier