Gene : Brara.G02543 B. rapa FPsc v1.3
Defline:  (1 of 11) 1.13.11.12 - Linoleate 13S-lipoxygenase / Lipoxidase Genomic Order:  2543
Name:  ? Brara.G02543 Secondary Identifier:  ? PAC:30635339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5409 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5410 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02543 0.5kb upstream 0.5kb upstream 6542 true A07: 21113401-21119942 Brassica rapa FPsc
Brara.G02543 0.5kb upstream 0.5kb upstream 500 false A07: 21113401-21113900 Brassica rapa FPsc
Brara.G02543 0.5kb downstream 0.5kb downstream 6542 true A07: 21113901-21120442 Brassica rapa FPsc
Brara.G02543 0.5kb downstream 0.5kb downstream 500 false A07: 21119943-21120442 Brassica rapa FPsc
Brara.G02543 1.0kb upstream 1.0kb upstream 7042 true A07: 21112901-21119942 Brassica rapa FPsc
Brara.G02543 1.0kb upstream 1.0kb upstream 1000 false A07: 21112901-21113900 Brassica rapa FPsc
Brara.G02543 1.0kb downstream 1.0kb downstream 7042 true A07: 21113901-21120942 Brassica rapa FPsc
Brara.G02543 1.0kb downstream 1.0kb downstream 1000 false A07: 21119943-21120942 Brassica rapa FPsc
Brara.G02543 2.0kb upstream 2.0kb upstream 8042 true A07: 21111901-21119942 Brassica rapa FPsc
Brara.G02543 2.0kb upstream 2.0kb upstream 2000 false A07: 21111901-21113900 Brassica rapa FPsc
Brara.G02543 2.0kb downstream 2.0kb downstream 8042 true A07: 21113901-21121942 Brassica rapa FPsc
Brara.G02543 2.0kb downstream 2.0kb downstream 2000 false A07: 21119943-21121942 Brassica rapa FPsc
Brara.G02543 5.0kb upstream 5.0kb upstream 11042 true A07: 21108901-21119942 Brassica rapa FPsc
Brara.G02543 5.0kb upstream 5.0kb upstream 5000 false A07: 21108901-21113900 Brassica rapa FPsc
Brara.G02543 5.0kb downstream 5.0kb downstream 11042 true A07: 21113901-21124942 Brassica rapa FPsc
Brara.G02543 5.0kb downstream 5.0kb downstream 5000 false A07: 21119943-21124942 Brassica rapa FPsc
Brara.G02543 10.0kb upstream 10.0kb upstream 16042 true A07: 21103901-21119942 Brassica rapa FPsc
Brara.G02543 10.0kb upstream 10.0kb upstream 10000 false A07: 21103901-21113900 Brassica rapa FPsc
Brara.G02543 10.0kb downstream 10.0kb downstream 16042 true A07: 21113901-21129942 Brassica rapa FPsc
Brara.G02543 10.0kb downstream 10.0kb downstream 10000 false A07: 21119943-21129942 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356249 5261 Brassicaceae View MSA
123794386 5264 Brassicales-Malvales View MSA
124292194 5266 SBM View MSA
124251486 5268 Malvidae View MSA
124069762 5270 Rosid View MSA
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier