Gene : Brara.A03560 B. rapa FPsc v1.3
Defline:  (1 of 3) 4.1.1.1 - Pyruvate decarboxylase / Pyruvic decarboxylase Genomic Order:  3560
Name:  ? Brara.A03560 Secondary Identifier:  ? PAC:30638408
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5486 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6330 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03560 0.5kb upstream 0.5kb upstream 3104 true A01: 28917218-28920321 Brassica rapa FPsc
Brara.A03560 0.5kb upstream 0.5kb upstream 500 false A01: 28917218-28917717 Brassica rapa FPsc
Brara.A03560 0.5kb downstream 0.5kb downstream 3104 true A01: 28917718-28920821 Brassica rapa FPsc
Brara.A03560 0.5kb downstream 0.5kb downstream 500 false A01: 28920322-28920821 Brassica rapa FPsc
Brara.A03560 1.0kb upstream 1.0kb upstream 3604 true A01: 28916718-28920321 Brassica rapa FPsc
Brara.A03560 1.0kb upstream 1.0kb upstream 1000 false A01: 28916718-28917717 Brassica rapa FPsc
Brara.A03560 1.0kb downstream 1.0kb downstream 3604 true A01: 28917718-28921321 Brassica rapa FPsc
Brara.A03560 1.0kb downstream 1.0kb downstream 1000 false A01: 28920322-28921321 Brassica rapa FPsc
Brara.A03560 2.0kb upstream 2.0kb upstream 4604 true A01: 28915718-28920321 Brassica rapa FPsc
Brara.A03560 2.0kb upstream 2.0kb upstream 2000 false A01: 28915718-28917717 Brassica rapa FPsc
Brara.A03560 2.0kb downstream 2.0kb downstream 4604 true A01: 28917718-28922321 Brassica rapa FPsc
Brara.A03560 2.0kb downstream 2.0kb downstream 2000 false A01: 28920322-28922321 Brassica rapa FPsc
Brara.A03560 5.0kb upstream 5.0kb upstream 7604 true A01: 28912718-28920321 Brassica rapa FPsc
Brara.A03560 5.0kb upstream 5.0kb upstream 5000 false A01: 28912718-28917717 Brassica rapa FPsc
Brara.A03560 5.0kb downstream 5.0kb downstream 7604 true A01: 28917718-28925321 Brassica rapa FPsc
Brara.A03560 5.0kb downstream 5.0kb downstream 5000 false A01: 28920322-28925321 Brassica rapa FPsc
Brara.A03560 10.0kb upstream 10.0kb upstream 12604 true A01: 28907718-28920321 Brassica rapa FPsc
Brara.A03560 10.0kb upstream 10.0kb upstream 10000 false A01: 28907718-28917717 Brassica rapa FPsc
Brara.A03560 10.0kb downstream 10.0kb downstream 12604 true A01: 28917718-28930321 Brassica rapa FPsc
Brara.A03560 10.0kb downstream 10.0kb downstream 10000 false A01: 28920322-28930321 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121506466 5273 Angiosperm Singleton cluster - no MSA
122352646 5261 Brassicaceae Singleton cluster - no MSA
123791351 5264 Brassicales-Malvales Singleton cluster - no MSA
124289266 5266 SBM Singleton cluster - no MSA
124142635 5268 Malvidae Singleton cluster - no MSA
123869480 5270 Rosid Singleton cluster - no MSA
123454033 5271 Pentapetalae Singleton cluster - no MSA
122489486 5272 Eudicot Singleton cluster - no MSA
120779656 5274 Embryophyte Singleton cluster - no MSA
123426958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier