Gene : Brara.A03578 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13377 - PLACENTAL PROTEIN 6 Genomic Order:  3578
Name:  ? Brara.A03578 Secondary Identifier:  ? PAC:30639828
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03578 0.5kb upstream 0.5kb upstream 2884 true A01: 29004910-29007793 Brassica rapa FPsc
Brara.A03578 0.5kb upstream 0.5kb upstream 500 false A01: 29007294-29007793 Brassica rapa FPsc
Brara.A03578 0.5kb downstream 0.5kb downstream 2884 true A01: 29004410-29007293 Brassica rapa FPsc
Brara.A03578 0.5kb downstream 0.5kb downstream 500 false A01: 29004410-29004909 Brassica rapa FPsc
Brara.A03578 1.0kb upstream 1.0kb upstream 3384 true A01: 29004910-29008293 Brassica rapa FPsc
Brara.A03578 1.0kb upstream 1.0kb upstream 1000 false A01: 29007294-29008293 Brassica rapa FPsc
Brara.A03578 1.0kb downstream 1.0kb downstream 3384 true A01: 29003910-29007293 Brassica rapa FPsc
Brara.A03578 1.0kb downstream 1.0kb downstream 1000 false A01: 29003910-29004909 Brassica rapa FPsc
Brara.A03578 2.0kb upstream 2.0kb upstream 4384 true A01: 29004910-29009293 Brassica rapa FPsc
Brara.A03578 2.0kb upstream 2.0kb upstream 2000 false A01: 29007294-29009293 Brassica rapa FPsc
Brara.A03578 2.0kb downstream 2.0kb downstream 4384 true A01: 29002910-29007293 Brassica rapa FPsc
Brara.A03578 2.0kb downstream 2.0kb downstream 2000 false A01: 29002910-29004909 Brassica rapa FPsc
Brara.A03578 5.0kb upstream 5.0kb upstream 7384 true A01: 29004910-29012293 Brassica rapa FPsc
Brara.A03578 5.0kb upstream 5.0kb upstream 5000 false A01: 29007294-29012293 Brassica rapa FPsc
Brara.A03578 5.0kb downstream 5.0kb downstream 7384 true A01: 28999910-29007293 Brassica rapa FPsc
Brara.A03578 5.0kb downstream 5.0kb downstream 5000 false A01: 28999910-29004909 Brassica rapa FPsc
Brara.A03578 10.0kb upstream 10.0kb upstream 12384 true A01: 29004910-29017293 Brassica rapa FPsc
Brara.A03578 10.0kb upstream 10.0kb upstream 10000 false A01: 29007294-29017293 Brassica rapa FPsc
Brara.A03578 10.0kb downstream 10.0kb downstream 12384 true A01: 28994910-29007293 Brassica rapa FPsc
Brara.A03578 10.0kb downstream 10.0kb downstream 10000 false A01: 28994910-29004909 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353008 5261 Brassicaceae Singleton cluster - no MSA
123840015 5264 Brassicales-Malvales View MSA
124343638 5266 SBM View MSA
124242782 5268 Malvidae View MSA
124061195 5270 Rosid View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier